Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0942 |
Symbol | |
ID | 3775329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 947957 |
End bp | 949849 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799360 |
Product | FtsH peptidase |
Protein accession | YP_399959 |
Protein GI | 81299751 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGA ACTGGCGCAC CCTGGCACTC TGGACTCTGC CGATCCTGGT CATCGGCTTT TTCGTCTGGC AAGGGGGCAT TGGGGCGAAC CTGCAAACCA ATAGCACCAT CAATGCGGCC AGCACCCGCA TGACCTACGG TCGCTTCTTG GAATACCTCG ATGCGGGCCG AGTCACGGCA GTTGATTTTT ATGAAGGCGG CCGCACGGCG ATCGTCGAGG CCGTTGACCC TGACCTCGAT AACCGGCTGC AACGCCTCCG CGTCGATCTG CCTGGCACGT CTCCCGATTT GATCACGCGC CTGCGCGACA GCGACATTAA CTTCGACGTC CACCCACCGC GCAACGATGG CGCGATCTGG GGTCTGCTCA GCAACCTGAT CTTTCCGATC CTGCTGATCG TCGGTTTGTT CTTCCTGTTC CGTCGCTCTG GCAACGTGCC GGGTGGCCCC GGTCAAGCGA TGCAGTTCGG CAAATCGAAA GCCCGCTTCC AAATGGATGC CAAAACCGGC GTGCTGTTTG ACGATGTCGC TGGCATCGAA GAAGCCAAGG AAGAGCTGCA AGAAGTGGTG ACCTTCCTGA AAAACTCCGA GCGCTTCACC GCAGTCGGTG CCCGTATTCC TAAAGGCGTC TTGCTGGTTG GCCCTCCGGG GACGGGTAAA ACCCTGTTGG CTAAAGCGAT CGCGGGTGAA GCAGGTGTTC CTTTCTTCAG CATCTCCGGT TCAGAATTCG TGGAAATGTT TGTGGGTGTC GGTGCCAGCC GCGTCCGCGA CCTGTTCAAG AAAGCCAAAG AAAACGCACC TTGCATCGTC TTCATCGATG AAATTGACGC CGTCGGCCGT CAGCGTGGCG CCGGTATTGG CGGTGGTAAC GACGAGCGGG AACAAACCCT CAACCAGTTG TTGACCGAAA TGGACGGTTT TGAGGGCAAC ACCGGCATTA TCATCATCGC GGCCACCAAC CGCCCCGATG TCTTGGATGC AGCGCTGACC CGTCCTGGCC GTTTCGATCG CCAGATCATC GTTGATGCAC CGGACATCAA AGGCCGTCTG GAAATCCTCA AGGTTCACGC CCGTAACAAG AAACTGGCGG AAGATGTCTC CCTGGATGTG ATCGCCCGCC GGACGCCGGG TTTCGCCGGT GCTGATTTGG CCAACCTGCT GAACGAAGCC GCAATTTTGA CTGCCCGTCG ACGTAAAGAT GCGATCACGC TGACGGAAAT TGATGACGCC GTCGATCGCG TCGTCGCCGG TATGGAAGGT ACGCCGCTGG TCGATGGCAA GAGCAAGCGC TTGATTGCTT ACCACGAGGT GGGTCACGCG ATCGTGGGCA CCTTGGTCAA AGACCATGAC CCGGTTCAGA AAGTGACGCT GATTCCTCGC GGCCAAGCTC AAGGTCTGAC CTGGTTCGCG CCGGATGAAG AGCAAGGCTT GACCTCGCGG GCGCAAATTC TGGCTCGGAT TAAAGGCGCC CTCGGCGGCC GGGCTGCGGA AGATGTGATC TTTGGCCATG ACGAGGTGAC CACCGGTGCA GGCAATGACT TGCAACAGGT GACGGGCATG GCGCGTCAGA TGGTGACTCG CTTTGGCATG TCGGATCTGG GGCCGCTGTC GCTGGAAGGT CAAAGTCAAG AGGTGTTCTT GGGCCGCGAT CTGATGACGC GATCGGAATA CTCGGAGCGG ATTGCCATCC GCATTGATGC CCAGGTTCAT GACATCGTCG ACCACTGCTA CCAAGAAACG CTGCAGTTGA TTCGCGACAA CCGCATCGTG ATCGATCGCC TCGTCGATCT GCTGATTGAA AAAGAAACGA TCGACGGCGA TGAATTCCGT CAGATTGTGG CTGAGTACTG CCAAGTCCCT GAGAAAGAAC GATTTGTGCC TCAGCTGATC TAG
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Protein sequence | MKWNWRTLAL WTLPILVIGF FVWQGGIGAN LQTNSTINAA STRMTYGRFL EYLDAGRVTA VDFYEGGRTA IVEAVDPDLD NRLQRLRVDL PGTSPDLITR LRDSDINFDV HPPRNDGAIW GLLSNLIFPI LLIVGLFFLF RRSGNVPGGP GQAMQFGKSK ARFQMDAKTG VLFDDVAGIE EAKEELQEVV TFLKNSERFT AVGARIPKGV LLVGPPGTGK TLLAKAIAGE AGVPFFSISG SEFVEMFVGV GASRVRDLFK KAKENAPCIV FIDEIDAVGR QRGAGIGGGN DEREQTLNQL LTEMDGFEGN TGIIIIAATN RPDVLDAALT RPGRFDRQII VDAPDIKGRL EILKVHARNK KLAEDVSLDV IARRTPGFAG ADLANLLNEA AILTARRRKD AITLTEIDDA VDRVVAGMEG TPLVDGKSKR LIAYHEVGHA IVGTLVKDHD PVQKVTLIPR GQAQGLTWFA PDEEQGLTSR AQILARIKGA LGGRAAEDVI FGHDEVTTGA GNDLQQVTGM ARQMVTRFGM SDLGPLSLEG QSQEVFLGRD LMTRSEYSER IAIRIDAQVH DIVDHCYQET LQLIRDNRIV IDRLVDLLIE KETIDGDEFR QIVAEYCQVP EKERFVPQLI
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