Gene Synpcc7942_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0941 
Symbol 
ID3775328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp946064 
End bp947773 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content53% 
IMG OID637799359 
ProductATPase 
Protein accessionYP_399958 
Protein GI81299750 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTC TCGATCGCAT CTCTAAGATT TATCCCACCG GTGAGGTGCT CCGAGATGTG 
AGCTGGGAAG TCAAACCCGG CGATCGTATT GGTTTAGTCG GGGTGAATGG GGCTGGCAAG
TCGACCCAAA TGCGGATTAT TGCCGGTTTG GAAGAGGCCA CTAGCGGCGA AATTATTCGG
CCCAGTAGCC TCAAAATTGC TTATCTGCAG CAAGAGTTTG ATATCGATCC TGAGCGCACA
GTTCGGGAAG AACTCTGGCA AGCCTTTGGT GAAGCAACAA CCGTTTTTAA TCAGTTGTCG
GAGGTGGAGC ACCAGATGCA AACCGCCGAA CCTGAGCAAC TAGACGATTT GATCCATCAG
CTCGATCGCT TACAACGGCG GTTTGAGGCC TTGGATGGCT ATGCGATCGA TGCCCGCATT
GCCAAGCTTC TACCTGATCT GGGTTTTGGT CTGGAGGATG GCGATCGCTC GGTGGCGGCC
TTTAGTGGCG GCTGGCAGAT GCGGATGGGC TTGGGCAAAA TTCTGCTGCA AGAGCCTGAT
CTACTGCTGC TGGACGAGCC GACTAACCAC CTCGATCTTG AAACGATTGA ATGGTTAGAA
ACCTACCTGA AAGGCTTGAG CCAGCCGATG GTGATCATTT CACACGATCG CGAGTTTCTC
GATCGGCTCT GCACCCAAAT TGTGGAAACA GAACGCGGGG TAGCTCGCAC CTATCTCGGT
AACTACAGCG ACTATCTCAC TCAGAAAGAG CTGGAAAAGA CAGCGCAATT TGCAGCCTTT
GAGCGTCAGC AAAAAGAACT CGCTGAGCAA CAAGCCTTTA TCGATCGCTT TCGGGCCAGC
GCGACTCGCA GCACCCAGGC CAAAAGTCGC GAAAAGCAAC TCGAGAAAGT CGAGCGAATT
GAAGCACCCG AAGATAACTT GCGCGGTATT CAGTTTCGCT TTCCACCCGC ACCTCGCAGC
GGCCGCGAAG TGGTGATGAT TGAGGATCTA ACCCACGCCT ACAACGACAA GATCCTGTTC
CTTGGGGCAG AATTGCTAAT TGAACGGGGC GATCGCATTG CCTTTCTCGG GCCGAATGGC
GCGGGTAAGT CTACCCTGTT GCGGCTGATT CTGGGGCGTG AGCCGCTGCT GGAAGGCAAA
GTGGAACTCG GTGCCCACCA AGTCATCCCC AGCTATTTTG AGCAGAATCA AGCGGAAGCG
CTAGATCTCG AAAAGACAGT GCTCGATACG ATTCATGACG AGGTGCCGTC TTGGAAGGAC
TCAGAAGTTC GCACCCTTTT GGGGAGTTTC TGTTTCCGCT CTGACACTGT CTTCAAGAAA
GTAGGGGCTC TAAGTGGTGG TGAGAAAGCA CGACTAGCGC TGGCAAAAAT GTTGCTGCAG
CCTGCCAACT TGTTGATTCT CGATGAGCCA ACGAACCACC TCGATATCCC TGCCAAGGAA
ATGCTGGAGG AAGCTCTACG AGAGTACGAA GGAACGGCGC TAATTGTGTC GCACGATCGC
TATTTCGTAT CGAGAGTTGC CAATAAGATT GTCGAAATTC GGGATGGCGA GTTCCGCGTT
TATGCCGGCG ATTATCACTA TTACCTCGAG CAAATTCAGC TGAAGAAAGA GCGAGAGCGG
CTGGCGGCAA TAGAGGCAGA AAAAGCTTCG AAGGCAGCGG CGAAGCGTGC TAAGCAAAAA
GCCAAACAGC AAGAACGCCG TCAGTCCTAA
 
Protein sequence
MLRLDRISKI YPTGEVLRDV SWEVKPGDRI GLVGVNGAGK STQMRIIAGL EEATSGEIIR 
PSSLKIAYLQ QEFDIDPERT VREELWQAFG EATTVFNQLS EVEHQMQTAE PEQLDDLIHQ
LDRLQRRFEA LDGYAIDARI AKLLPDLGFG LEDGDRSVAA FSGGWQMRMG LGKILLQEPD
LLLLDEPTNH LDLETIEWLE TYLKGLSQPM VIISHDREFL DRLCTQIVET ERGVARTYLG
NYSDYLTQKE LEKTAQFAAF ERQQKELAEQ QAFIDRFRAS ATRSTQAKSR EKQLEKVERI
EAPEDNLRGI QFRFPPAPRS GREVVMIEDL THAYNDKILF LGAELLIERG DRIAFLGPNG
AGKSTLLRLI LGREPLLEGK VELGAHQVIP SYFEQNQAEA LDLEKTVLDT IHDEVPSWKD
SEVRTLLGSF CFRSDTVFKK VGALSGGEKA RLALAKMLLQ PANLLILDEP TNHLDIPAKE
MLEEALREYE GTALIVSHDR YFVSRVANKI VEIRDGEFRV YAGDYHYYLE QIQLKKERER
LAAIEAEKAS KAAAKRAKQK AKQQERRQS