Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0941 |
Symbol | |
ID | 3775328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 946064 |
End bp | 947773 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637799359 |
Product | ATPase |
Protein accession | YP_399958 |
Protein GI | 81299750 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGTC TCGATCGCAT CTCTAAGATT TATCCCACCG GTGAGGTGCT CCGAGATGTG AGCTGGGAAG TCAAACCCGG CGATCGTATT GGTTTAGTCG GGGTGAATGG GGCTGGCAAG TCGACCCAAA TGCGGATTAT TGCCGGTTTG GAAGAGGCCA CTAGCGGCGA AATTATTCGG CCCAGTAGCC TCAAAATTGC TTATCTGCAG CAAGAGTTTG ATATCGATCC TGAGCGCACA GTTCGGGAAG AACTCTGGCA AGCCTTTGGT GAAGCAACAA CCGTTTTTAA TCAGTTGTCG GAGGTGGAGC ACCAGATGCA AACCGCCGAA CCTGAGCAAC TAGACGATTT GATCCATCAG CTCGATCGCT TACAACGGCG GTTTGAGGCC TTGGATGGCT ATGCGATCGA TGCCCGCATT GCCAAGCTTC TACCTGATCT GGGTTTTGGT CTGGAGGATG GCGATCGCTC GGTGGCGGCC TTTAGTGGCG GCTGGCAGAT GCGGATGGGC TTGGGCAAAA TTCTGCTGCA AGAGCCTGAT CTACTGCTGC TGGACGAGCC GACTAACCAC CTCGATCTTG AAACGATTGA ATGGTTAGAA ACCTACCTGA AAGGCTTGAG CCAGCCGATG GTGATCATTT CACACGATCG CGAGTTTCTC GATCGGCTCT GCACCCAAAT TGTGGAAACA GAACGCGGGG TAGCTCGCAC CTATCTCGGT AACTACAGCG ACTATCTCAC TCAGAAAGAG CTGGAAAAGA CAGCGCAATT TGCAGCCTTT GAGCGTCAGC AAAAAGAACT CGCTGAGCAA CAAGCCTTTA TCGATCGCTT TCGGGCCAGC GCGACTCGCA GCACCCAGGC CAAAAGTCGC GAAAAGCAAC TCGAGAAAGT CGAGCGAATT GAAGCACCCG AAGATAACTT GCGCGGTATT CAGTTTCGCT TTCCACCCGC ACCTCGCAGC GGCCGCGAAG TGGTGATGAT TGAGGATCTA ACCCACGCCT ACAACGACAA GATCCTGTTC CTTGGGGCAG AATTGCTAAT TGAACGGGGC GATCGCATTG CCTTTCTCGG GCCGAATGGC GCGGGTAAGT CTACCCTGTT GCGGCTGATT CTGGGGCGTG AGCCGCTGCT GGAAGGCAAA GTGGAACTCG GTGCCCACCA AGTCATCCCC AGCTATTTTG AGCAGAATCA AGCGGAAGCG CTAGATCTCG AAAAGACAGT GCTCGATACG ATTCATGACG AGGTGCCGTC TTGGAAGGAC TCAGAAGTTC GCACCCTTTT GGGGAGTTTC TGTTTCCGCT CTGACACTGT CTTCAAGAAA GTAGGGGCTC TAAGTGGTGG TGAGAAAGCA CGACTAGCGC TGGCAAAAAT GTTGCTGCAG CCTGCCAACT TGTTGATTCT CGATGAGCCA ACGAACCACC TCGATATCCC TGCCAAGGAA ATGCTGGAGG AAGCTCTACG AGAGTACGAA GGAACGGCGC TAATTGTGTC GCACGATCGC TATTTCGTAT CGAGAGTTGC CAATAAGATT GTCGAAATTC GGGATGGCGA GTTCCGCGTT TATGCCGGCG ATTATCACTA TTACCTCGAG CAAATTCAGC TGAAGAAAGA GCGAGAGCGG CTGGCGGCAA TAGAGGCAGA AAAAGCTTCG AAGGCAGCGG CGAAGCGTGC TAAGCAAAAA GCCAAACAGC AAGAACGCCG TCAGTCCTAA
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Protein sequence | MLRLDRISKI YPTGEVLRDV SWEVKPGDRI GLVGVNGAGK STQMRIIAGL EEATSGEIIR PSSLKIAYLQ QEFDIDPERT VREELWQAFG EATTVFNQLS EVEHQMQTAE PEQLDDLIHQ LDRLQRRFEA LDGYAIDARI AKLLPDLGFG LEDGDRSVAA FSGGWQMRMG LGKILLQEPD LLLLDEPTNH LDLETIEWLE TYLKGLSQPM VIISHDREFL DRLCTQIVET ERGVARTYLG NYSDYLTQKE LEKTAQFAAF ERQQKELAEQ QAFIDRFRAS ATRSTQAKSR EKQLEKVERI EAPEDNLRGI QFRFPPAPRS GREVVMIEDL THAYNDKILF LGAELLIERG DRIAFLGPNG AGKSTLLRLI LGREPLLEGK VELGAHQVIP SYFEQNQAEA LDLEKTVLDT IHDEVPSWKD SEVRTLLGSF CFRSDTVFKK VGALSGGEKA RLALAKMLLQ PANLLILDEP TNHLDIPAKE MLEEALREYE GTALIVSHDR YFVSRVANKI VEIRDGEFRV YAGDYHYYLE QIQLKKERER LAAIEAEKAS KAAAKRAKQK AKQQERRQS
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