Gene Synpcc7942_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0940 
Symbol 
ID3775327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp945289 
End bp945639 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content55% 
IMG OID637799358 
ProductXRE family transcriptional regulator 
Protein accessionYP_399957 
Protein GI81299749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGC TGTTTGCGGC GACGGCAGCA GAACGAGCGA GCCGACTAGC CACCCTCCTA 
CAGGAGTTCC GCTTCCAAGT TCATAAACCG CTGTTCGAAT CTGCAGGCTT AGCCGCGCCA
CCCCTATCTA AGCGGCAACT ATCCCAACTG CTAGGCGTGT CACCGACCCT GATTGTCAAA
TATGAAAATG CCGAAATTGA CCCCCTCGAT ATTCGCTGGG GCTTAATGAA CCGGATTGCT
GAAGTTCTGG GGCTGTCCCT CGATGAACTG AATGGCGTGT TCTCTGGTCA GCAAGACTCC
TCCGCCCTAC TGGAGCGATC GCAGAAGAAA AGCAACCGCC GCTCTAGCTG A
 
Protein sequence
MSKLFAATAA ERASRLATLL QEFRFQVHKP LFESAGLAAP PLSKRQLSQL LGVSPTLIVK 
YENAEIDPLD IRWGLMNRIA EVLGLSLDEL NGVFSGQQDS SALLERSQKK SNRRSS