Gene Synpcc7942_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0915 
Symbol 
ID3774093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp922388 
End bp922837 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content55% 
IMG OID637799332 
Product3-dehydroquinate dehydratase 
Protein accessionYP_399932 
Protein GI81299724 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.249833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGAAAA TTCTTGTCTT GCATGGCCCC AACCTCAACC TCTTGGGGCT GAGAGAGCCG 
ACAATCTACG GCCAAACAAC GCTGGCTGAA ATTGATGCCG ACCTAATTCA ACTGGGTCAG
ACTCTTGGGG TTGACGTTTC AACACTCCAA AGCAACCACG AGGGCGTCTT GGTCGATGCC
ATCCACACAG CGCGGGAGCA TCAAGACGGT CTTGTGATCA ATGCCGGTGC TTACACCCAC
ACCAGTGTGG CGATTCGAGA CGCGATCGCG GGCACCCAAA TTCCGACGGT GGAAGTCCAT
CTCAGCAATA TCCACAAGCG CGAAGCCTTT CGGCATCATT CCTATCTAGC CCCCGTTGTG
GTTGGCCAGA TTTGCGGCTT TGGCCCCGAT AGTTACCGGC TTGGACTGCA GGCAATCGTC
AACCACTTGC AAGCCCTAGC AACGGTATGA
 
Protein sequence
MLKILVLHGP NLNLLGLREP TIYGQTTLAE IDADLIQLGQ TLGVDVSTLQ SNHEGVLVDA 
IHTAREHQDG LVINAGAYTH TSVAIRDAIA GTQIPTVEVH LSNIHKREAF RHHSYLAPVV
VGQICGFGPD SYRLGLQAIV NHLQALATV