| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0887 |
|---|
| Symbol | rpsL |
|---|
| ID | 3774064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 893750 |
|---|
| End bp | 894124 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799303 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_399904 |
|---|
| Protein GI | 81299696 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000822603 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAA TCCAGCAGCT GATTCGCGAC GAACGCGAAA AAATTACCAA GAAGACAAAA
TCTCCCGCGC TGAAAAACTG CCCGCAGCGG CGTGGCGTTT GCACTCGCGT CTACACCACG
ACCCCGAAAA AGCCCAACTC GGCCTTGCGG AAAGTGGCAC GGGTTCGCTT GACCTCAGGT
TTTGAAGTCA CTGCCTATAT CCCTGGCATT GGTCACAACC TGCAAGAGCA CTCGGTTGTG
ATGATTCGCG GCGGTCGGGT CAAAGACCTA CCCGGTGTGC GCTATCACAT CATCCGCGGC
ACCCTTGATA CCGCCGGTGT CAAAGACCGT CGCCAAAGCC GTTCCAAATA CGGCGCGAAG
CGTCCGAAGG CCTAG
|
|---|
| Protein sequence | MPTIQQLIRD EREKITKKTK SPALKNCPQR RGVCTRVYTT TPKKPNSALR KVARVRLTSG
FEVTAYIPGI GHNLQEHSVV MIRGGRVKDL PGVRYHIIRG TLDTAGVKDR RQSRSKYGAK
RPKA
|
|---|
| |