Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0881 |
Symbol | |
ID | 3774058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 887552 |
End bp | 888427 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799297 |
Product | prephenate dehydratase |
Protein accession | YP_399898 |
Protein GI | 81299690 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00114823 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGAGC GGGCGATCGC CCATTTGGGT CCCGTGGGTA CCTATGCCGA AATGGCTGCC CTGCGCTTTC AAGCTTGGTT GACCCAGCAG GATCAACAGC CCAGCCGTCT GCTTGCTTGT CGGAGCATTC CAGCCACCTT ACAGACCTTG GCTGATGGTG CTGTTGACTA TGCCGTTGTG CCCGTCGAAA ACTCGGTAGA GGGCAGCGTT GCCGCCACCC TAGATAGTCT TTGGCAGTTG CCCCAACTGT CGATTCAGCG GGCACTCATT CTACCGATTG CCCATGCCCT GATTAGTTTT GAGAGCGATC GCACGGCGAT CCGTCAGGTG CTCTCCCATC CCCAGGCCCT CGCGCAATGC CAGCAGTGGT TGCAGCGGCA TCTGCCCCAA GCGGAATTGA TCCCCGCCAA TTCCACCACC GAGGCCCTGC AGGATCTCGA ACGCCATCCC CAGCGGGCGG TCATTGCTTC GACCCGCGCT GCAGAACTCT ATCAGATGCC AATTCAGTCC TTTCCCATCA ATGATTCCCC CGATAATCGC ACCCGCTTTT GGGTGATTAG CCGCAGCCCT ACGCCGGGCG GGGCTTGTAC GTCCCTGAAC TTCAGCCTGG ACGCCAATGT GCCGGGTGCG CTGGTCAAAC CCCTGCAGAT TTTGGCCGAT CGCCGGATTA ACCTCAGCCG GATTGAGTCG CGACCAACCA AGCGATCGCT GGGTGAATAT CTCTTTTTCT TGGACTTAGA GGCCGATCTG CGGGATCCTG CGATCGCAGC AGCCGTTCAA GCCGTAGCTG ACTGTACAGA ACAACTGCGG GTGCTTGGCA GTTATGACAG CCTCGACTTT ACCCAGTCTG TTTTAGTACC TGCACAGGCT CGCTAG
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Protein sequence | MSERAIAHLG PVGTYAEMAA LRFQAWLTQQ DQQPSRLLAC RSIPATLQTL ADGAVDYAVV PVENSVEGSV AATLDSLWQL PQLSIQRALI LPIAHALISF ESDRTAIRQV LSHPQALAQC QQWLQRHLPQ AELIPANSTT EALQDLERHP QRAVIASTRA AELYQMPIQS FPINDSPDNR TRFWVISRSP TPGGACTSLN FSLDANVPGA LVKPLQILAD RRINLSRIES RPTKRSLGEY LFFLDLEADL RDPAIAAAVQ AVADCTEQLR VLGSYDSLDF TQSVLVPAQA R
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