Gene Synpcc7942_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0870 
Symbol 
ID3774047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp871886 
End bp872113 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content45% 
IMG OID637799286 
Producthypothetical protein 
Protein accessionYP_399887 
Protein GI81299679 
COG category[N] Cell motility 
COG ID[COG1724] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 



Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000055222 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0369438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAT TGCCACGCGT CTCAAGCCGA GAGGTGATTC GGGCACTGGA ACGTTTAGGG 
TTTGTATTGA TTCGACAGAC AGGTAGTCAT GTCGTGCTGA AGAAAGTCAC AGCAGAAGGT
GAAATTGGCT GTGTTGTTCC TGTCCATCGA GAGTTAAAAG TCGGCACTCT AAATAGCATC
CTAAAACAGG CAAAAGTGAC CATTGAGGAT TTCATTGATA ACCTGTAA
 
Protein sequence
MPKLPRVSSR EVIRALERLG FVLIRQTGSH VVLKKVTAEG EIGCVVPVHR ELKVGTLNSI 
LKQAKVTIED FIDNL