Gene Synpcc7942_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0869 
Symbol 
ID3774046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp871262 
End bp871852 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content52% 
IMG OID637799285 
Producthypothetical protein 
Protein accessionYP_399886 
Protein GI81299678 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000493602 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0426802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCGA TCGCAGCTTG GTTCAAACCC CTGCAACAGT GGGCGACCAG TCAGCGCGAT 
CGCCCTTCTC CGGCTTGGCG ACAACTGCAA CAAATCCTGC AGCAACGCTT GCAGCAAAAC
CCGAATTATC GCTTTCAGAA TGCGCTGGAA GTGGAAGTGG CCGCGAGTTT AGGTCTGCGG
TTAGATGTTA ACTGTGCGGC TGTTGAAGAC TGGCTAAGGC TACCTGAGAT TACACCTAGG
CAAGCAACAA CTTTGGTGCA GCTACGGCAG CAAGGCTTCT TCTTTGCGGA TCTGGACGAT
GTGGCTCAGG CCTTGGGATT AGACGTTAGC CAATTACAAG CGATCGCGCC GATTCTGGTG
TTTCGCTATT ACGAAGCAGA ACCTGAAGTT GCGATCGTTC CTTGTTGGGT GAATCGAGCC
AAATATCCTG AAATTCTAGA GACTCTACCA GGGGTGAATG AAGCGATCGC CCGTGAGATT
ATTCATCAGC GTTTGCTGCG CGGTCCCTAT CGAGATATCG CTGATTTTCA GCGACGGCTA
CAACTATCTC CAGAAGCGAT CGCCCAGTGG CTACCTTGTC TCCGCTTCTG A
 
Protein sequence
MEAIAAWFKP LQQWATSQRD RPSPAWRQLQ QILQQRLQQN PNYRFQNALE VEVAASLGLR 
LDVNCAAVED WLRLPEITPR QATTLVQLRQ QGFFFADLDD VAQALGLDVS QLQAIAPILV
FRYYEAEPEV AIVPCWVNRA KYPEILETLP GVNEAIAREI IHQRLLRGPY RDIADFQRRL
QLSPEAIAQW LPCLRF