Gene Synpcc7942_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0868 
Symbol 
ID3774045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp869505 
End bp871253 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content57% 
IMG OID637799284 
Producthypothetical protein 
Protein accessionYP_399885 
Protein GI81299677 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000924249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0678292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTGA CTGCTCTCTC TGTTGAGTCA GCCGCGATCG CAGCGGCTCC CTCGCCGCCC 
CAGCCACCCC GTCGTCGCTA TCGCTGGGAT CGGCGACGCT ATCCACGCTG GCAGCGCAGT
GCCGATATCT GGCGGTTTGT GCTGCTGCTT AGTTTTCGAC TGTGGCTGAT TCAGCGACCT
TGGACGTATT TCGGAGGATT CAGTAGCGAT CGCCAAAACC AACGCCGCCG CAAATTAGCG
AGTTGGATCC GCGAAACCTG TCTGGATCTG GGGCCAACCT TTATTAAAGT TGGGCAGCTC
TTTTCAACGC GGGCCGATCT ATTTCCAGCC GAGTATGTCG AAGAACTCTC GAAGCTGCAG
GATCAAGTCC CAGCCTTTGA TCTAGAGCAG GTTCAACAGA TCCTGAGCAA TGAATTGGGG
GCGAGTCCTG AAGAACTGTT CAGTGACTTT GATCCGGTTC CTCTCGCGGC CGCCAGCCTA
GGCCAAGTTC ACCGCGCCCG TCTGAAGACC GGCGAAGCCG TGGTGGTCAA GGTGCAACGC
CCCGGCCTCC AGCAACTGTT TACCGTCGAT TTGGCGATTC TGCGGGGCAT TGCTGAATAC
TTTCAGCGCC ATCGCCGCTG GGGCCAAGGG CGCGATTGGG TGGGCATTTA CGAAGAATGC
TGCCGAATCC TTTGGCAAGA GACCGACTAC CTGCGCGAGG GTCGCAATGC CGATCGCTTT
CGGCGTGATT TTCGCGACTG CGACTGGTTG CTGGTGCCGC GAGTCTATTG GCGCTATGCC
AGTCCGAGGG TGCTGACGCT GGAATATCTG CCCGGCATCA AAATCAGTGA CTACACGGCG
CTGGAAGCGG CCAACCTCGA TCGCCAGAAA ATTTCGCAGC TCAACGCCGA AGCCTACCTA
CGCCAAGTGC TCAATCACGG CTTCTTCCAT GCTGATCCGC ATCCGGGCAA CTTGGCGGTT
AGTCCGACGG GTCGCCTGAT TTTCTACGAC TTCGGCATGA TGGGCGAGAT TCGCACTGAT
GTCCGCAGTA AGTTGATGCA GGTCTTCTTA GGCATTGCCC GCAAAGATGC TGATGATATC
GTCAGTGCCC TAGTCGAACT GGGAGCGCTT TTGCCCACAG GCGATCTCGG CCCTGTGCGG
CGATCGGTGC AATATCTGCT CGATAACTTC CTCGATCGCC CCTTTGAAGG CCAGTCGATC
AGTGCGATTA GCGACGATAT TTACGAGATT GCCTACGACC AGCCGTTTCG CTTTCCCGCT
ACCTTTACCT TTGTGATGCG AGCGTTTTCG ACCCTGGAAG GGGTTGGCAA AGGCTTGGAT
CCCGATTTCA ATTTCATGAC GGTTGCCAAA CCCTACGCCC TTGAGATTAT GTCTGACGCC
ACTCCGAATC CTGCTGGTTT GTTGAATGAG TTCAGTCGCC AAGCGCTTGC GGTGGGCAAC
TCAGCCTTGG GGCTGCCGCG CCGCTTGGAT GACACGCTGG ACAAGTTAGA GCAGGGCGAT
TTGCGCGTGC GTGTCCGTGC CAGCGAAAGC GATCGCCTCC TACGTCGCCT CCTGCTGACG
CAGCAGAGCC AGACTTGGGC GATTCTGACT GCAGCCCTGT GGATTGGCTC AGCGATTGTG
AGTTTGAGTG CCTTACCTCT ACTGGCGATC GCGCCGTTTG GTTTGGGATT GATTCCGTTG
GGACTTTTGA TTCGGACACA ATTGCGTCTG CGCCGCAGTG AACGGATGGG GAACGTTAGC
AACAACTAG
 
Protein sequence
MAVTALSVES AAIAAAPSPP QPPRRRYRWD RRRYPRWQRS ADIWRFVLLL SFRLWLIQRP 
WTYFGGFSSD RQNQRRRKLA SWIRETCLDL GPTFIKVGQL FSTRADLFPA EYVEELSKLQ
DQVPAFDLEQ VQQILSNELG ASPEELFSDF DPVPLAAASL GQVHRARLKT GEAVVVKVQR
PGLQQLFTVD LAILRGIAEY FQRHRRWGQG RDWVGIYEEC CRILWQETDY LREGRNADRF
RRDFRDCDWL LVPRVYWRYA SPRVLTLEYL PGIKISDYTA LEAANLDRQK ISQLNAEAYL
RQVLNHGFFH ADPHPGNLAV SPTGRLIFYD FGMMGEIRTD VRSKLMQVFL GIARKDADDI
VSALVELGAL LPTGDLGPVR RSVQYLLDNF LDRPFEGQSI SAISDDIYEI AYDQPFRFPA
TFTFVMRAFS TLEGVGKGLD PDFNFMTVAK PYALEIMSDA TPNPAGLLNE FSRQALAVGN
SALGLPRRLD DTLDKLEQGD LRVRVRASES DRLLRRLLLT QQSQTWAILT AALWIGSAIV
SLSALPLLAI APFGLGLIPL GLLIRTQLRL RRSERMGNVS NN