| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0847 |
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| Symbol | |
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| ID | 3774024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 841120 |
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| End bp | 842232 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637799263 |
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| Product | twitching motility protein |
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| Protein accession | YP_399865 |
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| Protein GI | 81299657 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.788432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGC CGACCATTGA ACAACTGGTG CGTAAGGCCT GCCAAGTGCA AGCATCTGAT
ATTCACCTGC GAGTGGGGCA CCCACCCTAC TTTCGCTTGC GGGAACAGAT GTATCCGCTC
CCCAATGCAC CAGCTGCGAC CGACAGCGAT ATGGCGAGCT GGCTTAATGA AATCCTGACA
CCAACGCAAC TGAGTCGTCT CAATGAAACC CAAGAGCTAG ACGAGGCCCT GTTTTACCCT
GACCTGATTC GCTGTCGGGT AATCTGCTTT CAAACGCTGG ATGGCGTCGC CATTACCCTG
CGGCTCATTC CTCTGCAGAT TCCCAGTCTG ATGGATCTGC AACTGCCCAC AGTTTTATCC
GCCCTGATTC AACGCAAACA GGGATTGATT TTGGTGACGG GGCCAACGGG GTCTGGCAAG
TCCACGACGC TGGCCGCCAT GATCAGTGAA ATGAATCAGT CCATGGCTCG GCACATCATC
ACGATCGAAG ATCCGATCGA ATATGTCTTT GAGCCAGTGC GATGCCTGAT CACCCAGCGA
GAGGTGGGGC GGCATGTCCA TGACTTTTCA TCGGCTGTAC GGGCAGCGCT GCGAGCCGAT
CCCGATGTCA TCCTCGTGGG AGAAATCCGC GATCAAAAAA CCCTCAAAGC AGCGATGCAT
GCGGCGCAAA CCGGCCACCT AGTGCTCGGG ACGCTCCATG CTCGCAATGC GATCGCCACA
ATCGATCGCC TGATTGGTCT GGACGGCATG GTCCAGAGCG CCGATACACG AAAGCAATTT
CTCGAACTAT TGGTTGCGGT GATTGCCCAA CAGCTAATCA CGACCTATTC GGGGAGTCGG
CGTGCTGTTT TAGAGGTGCT CATCAATACA CCTGCCATTC AGGACTATCT CACCCGAGGT
GAACTAGACG AGGCTTACCG GTTAATGGAG CTCGATACGA TTGAGGGGAT GCAGACCTTG
AATGAGGCAC TGATCACTGA GATTGAGCAA GGGCGACTCA GTATTGAAGA AGCCCTCAAA
GCTGCTGTCG ACCCCGGAGA TCTCGATCGC CGAATGCGGA TTGCTGGAAT CAGCCACTCC
TTTGGATTCT CCAGTTTCAA ATCCAGCGCC TGA
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| Protein sequence | MTAPTIEQLV RKACQVQASD IHLRVGHPPY FRLREQMYPL PNAPAATDSD MASWLNEILT
PTQLSRLNET QELDEALFYP DLIRCRVICF QTLDGVAITL RLIPLQIPSL MDLQLPTVLS
ALIQRKQGLI LVTGPTGSGK STTLAAMISE MNQSMARHII TIEDPIEYVF EPVRCLITQR
EVGRHVHDFS SAVRAALRAD PDVILVGEIR DQKTLKAAMH AAQTGHLVLG TLHARNAIAT
IDRLIGLDGM VQSADTRKQF LELLVAVIAQ QLITTYSGSR RAVLEVLINT PAIQDYLTRG
ELDEAYRLME LDTIEGMQTL NEALITEIEQ GRLSIEEALK AAVDPGDLDR RMRIAGISHS
FGFSSFKSSA
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