Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0836 |
Symbol | |
ID | 3774013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 831166 |
End bp | 832182 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799252 |
Product | hypothetical protein |
Protein accession | YP_399854 |
Protein GI | 81299646 |
COG category | [R] General function prediction only |
COG ID | [COG2144] Selenophosphate synthetase-related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0191838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.261675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATG CTGCGATTGC CCAAGATTTG GCTGCTCTCG CGGCTCAACT CCAAACCTTG GCAGGCTTGC AGGGCAAGCG CGATATTCAA GCAGCAGCAG CGAGTTTGCC CCATCGGCCC TTTCCCAAAT TGGGACTAGC AGCAGCCTTG GGTGATGATG CGGCTCTGTT ACCTGCGACT GCTAACCGCT TACTCTTCGC TTGCGAAGGA ATTCATCCCG ACTTAGTGGC AGAAGATCCT TGGTTTGCTG GCTGGAGTGG TGTGCTGGTG AACCTCAGTG ACATTGCCGC CATGGGTGGT CGTCCGATCG CGGTGGTCAA TAGTCTCTGG AGCCGCGATC GCCAGCATGC TGATCAGGTG TTCGCCGGTC TTCAGTTTGC CGCCGAGAAA TTTGGTATCC CGATCGTCGG GGGGCACTCC AACCTCCAAA GCCCCTACAG CGCCCTGTCC GTGGCAGTCC TAGGTCAAGT GGGTCCCCAC GTCCTCTCAG CGCGATCGGC CCAAGCCGGC GATCGTTGCT ACCTGTTGAT CAACCGTGAC GGCCAGTTCT ATCGCCACTA TCCCTTTTGG GATGCCGCCA CAGGGACAGC GCCGGAACAG CTGCGTCGCC ACTGGGAACT GATGGCGCAG TTAGCCGATG CTGGCTTGGT TTCAGCGGCT AAGGATGTCA GTATGGGCGG CTTGATTGGT ACCGCCGTGA TGTTCGCCGA AACCAGCGGT GCGGGGCTTG ATCTCCACCT CGATCGCCTC AGCTATCCAG CCGGAGTTAG TCGCGATCGC TGGTTGACCT GTTTTCCTAG CTTTGGCTTC CTCCTTGCCG TCCCTGAAGC TTGCTGCGAT CGCTTCCTAC AACGAGTCGC GACAGAACCA GATCTAACCT GTGATCACCT GGGTTCTTTC ACTAACACGG GTCAAGTGCG CCTCTGCGAT CGCCAAGCTC AAGTCTGTTT TTGGGACTGT CAAGAGCAGT CCTTGATGGG CTTTTCAGCG CTGACTGATC CTGAATCGCC ACACTGA
|
Protein sequence | MSDAAIAQDL AALAAQLQTL AGLQGKRDIQ AAAASLPHRP FPKLGLAAAL GDDAALLPAT ANRLLFACEG IHPDLVAEDP WFAGWSGVLV NLSDIAAMGG RPIAVVNSLW SRDRQHADQV FAGLQFAAEK FGIPIVGGHS NLQSPYSALS VAVLGQVGPH VLSARSAQAG DRCYLLINRD GQFYRHYPFW DAATGTAPEQ LRRHWELMAQ LADAGLVSAA KDVSMGGLIG TAVMFAETSG AGLDLHLDRL SYPAGVSRDR WLTCFPSFGF LLAVPEACCD RFLQRVATEP DLTCDHLGSF TNTGQVRLCD RQAQVCFWDC QEQSLMGFSA LTDPESPH
|
| |