Gene Synpcc7942_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0836 
Symbol 
ID3774013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp831166 
End bp832182 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content58% 
IMG OID637799252 
Producthypothetical protein 
Protein accessionYP_399854 
Protein GI81299646 
COG category[R] General function prediction only 
COG ID[COG2144] Selenophosphate synthetase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0191838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.261675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG CTGCGATTGC CCAAGATTTG GCTGCTCTCG CGGCTCAACT CCAAACCTTG 
GCAGGCTTGC AGGGCAAGCG CGATATTCAA GCAGCAGCAG CGAGTTTGCC CCATCGGCCC
TTTCCCAAAT TGGGACTAGC AGCAGCCTTG GGTGATGATG CGGCTCTGTT ACCTGCGACT
GCTAACCGCT TACTCTTCGC TTGCGAAGGA ATTCATCCCG ACTTAGTGGC AGAAGATCCT
TGGTTTGCTG GCTGGAGTGG TGTGCTGGTG AACCTCAGTG ACATTGCCGC CATGGGTGGT
CGTCCGATCG CGGTGGTCAA TAGTCTCTGG AGCCGCGATC GCCAGCATGC TGATCAGGTG
TTCGCCGGTC TTCAGTTTGC CGCCGAGAAA TTTGGTATCC CGATCGTCGG GGGGCACTCC
AACCTCCAAA GCCCCTACAG CGCCCTGTCC GTGGCAGTCC TAGGTCAAGT GGGTCCCCAC
GTCCTCTCAG CGCGATCGGC CCAAGCCGGC GATCGTTGCT ACCTGTTGAT CAACCGTGAC
GGCCAGTTCT ATCGCCACTA TCCCTTTTGG GATGCCGCCA CAGGGACAGC GCCGGAACAG
CTGCGTCGCC ACTGGGAACT GATGGCGCAG TTAGCCGATG CTGGCTTGGT TTCAGCGGCT
AAGGATGTCA GTATGGGCGG CTTGATTGGT ACCGCCGTGA TGTTCGCCGA AACCAGCGGT
GCGGGGCTTG ATCTCCACCT CGATCGCCTC AGCTATCCAG CCGGAGTTAG TCGCGATCGC
TGGTTGACCT GTTTTCCTAG CTTTGGCTTC CTCCTTGCCG TCCCTGAAGC TTGCTGCGAT
CGCTTCCTAC AACGAGTCGC GACAGAACCA GATCTAACCT GTGATCACCT GGGTTCTTTC
ACTAACACGG GTCAAGTGCG CCTCTGCGAT CGCCAAGCTC AAGTCTGTTT TTGGGACTGT
CAAGAGCAGT CCTTGATGGG CTTTTCAGCG CTGACTGATC CTGAATCGCC ACACTGA
 
Protein sequence
MSDAAIAQDL AALAAQLQTL AGLQGKRDIQ AAAASLPHRP FPKLGLAAAL GDDAALLPAT 
ANRLLFACEG IHPDLVAEDP WFAGWSGVLV NLSDIAAMGG RPIAVVNSLW SRDRQHADQV
FAGLQFAAEK FGIPIVGGHS NLQSPYSALS VAVLGQVGPH VLSARSAQAG DRCYLLINRD
GQFYRHYPFW DAATGTAPEQ LRRHWELMAQ LADAGLVSAA KDVSMGGLIG TAVMFAETSG
AGLDLHLDRL SYPAGVSRDR WLTCFPSFGF LLAVPEACCD RFLQRVATEP DLTCDHLGSF
TNTGQVRLCD RQAQVCFWDC QEQSLMGFSA LTDPESPH