Gene Synpcc7942_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0817 
Symbol 
ID3775995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp812331 
End bp812723 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID637799234 
Productferric uptake regulator family protein 
Protein accessionYP_399836 
Protein GI81299628 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCC GTCGCACCCA AAATCAGCAA AAGATCCTAG AAGTCCTGCA AGGGCTCAAA 
CAAGAGATTT CTGCTCAAGA CCTCTACATT GAGTTACGCC AACAGCAACA GAGCATGGGT
CTCGCCACTG TCTATCGATC GCTGGAAGCC TTAAAGCTCT CTGGACAACT GCAAGTTCGT
ACGCTGACGT CCGGCGAATC ACTCTATAGC GTGCACCGCG AAGACCGCCA TCATTTAACT
TGCCTACGCT GTAATATTTC GATCGCGATC GATGAATGCC CAGTGCATGC CCTCGAGCAA
GACCTGCAGC AAGCCTATGG TTTCGGGATC TTTTATCACA CCCTAGAATT CTTTGGTCTT
TGTCAGACTT GTCAAGCCTC AAAAGCAGGA TAA
 
Protein sequence
MASRRTQNQQ KILEVLQGLK QEISAQDLYI ELRQQQQSMG LATVYRSLEA LKLSGQLQVR 
TLTSGESLYS VHREDRHHLT CLRCNISIAI DECPVHALEQ DLQQAYGFGI FYHTLEFFGL
CQTCQASKAG