Gene Synpcc7942_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0805 
Symbol 
ID3775983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp798349 
End bp799095 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content58% 
IMG OID637799222 
Producthypothetical protein 
Protein accessionYP_399824 
Protein GI81299616 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCT GTTATTACGG TGCCAACAGC TGGCTAGTGC AATGGGCGGG TCTGCGCCTG 
CTGATTGATC CGTGGTTGGT GGGGCCGCTC AGCTTTGGTA ATCAGGCGTG GTTTTTTGAA
GCTCGCCACA AGAACCAGTG GACGATTCCT GAGGCGATCG ATGCTCTGAT TTTGTCCCAA
GGTCTGCCGG ATCATGCCCA TGTGCCGACC CTAGAACAGC TCGATCGCAG CATTCCTGTC
TTTGCGTCAC CCGCAGCGGC CAAAGTCGCT CGCAAGCTGG GCTTTAGCCA AGTCACGGTG
CTGAGTCCGG GTGAGAGCGT CACGATCGGC AATCTAGAAC TACAAGCCAC CAAGGGCGCA
CCCGTCCCGC AAGTCGAAAA CGGCTACCTA CTTCGCGATC GCCAGTCGGG ACAAAGCCTC
TACTACGAGC CGCACGGTTT TCATGACCCT AGCGTGACTG GCCCTGTGAC TGCTGCGATC
GCCCCAATCG AAAGCCTAGA CTTGCCGCTG GCAGGGCCGA TCATCCAAGG CGCCAAAACA
GCTCTGGAAT TAGCACAACG GCTGCAACTC CAAGTCCTAT TGCCAACGGC TACGGGCGGC
GATATCGAGT CCAAAGGCAT TCTCAACAAG ATCATTCGCG GCTCCGGCAG TCAGGCGGAA
CTGGAAGCGC AACTCAGCGC CGCAGGGCTA AAAACCAGCA TCTTCAAACC CAGCTTGGGT
GAGTTGCAAC CGCTGCCGGT GGGCTGA
 
Protein sequence
MEVCYYGANS WLVQWAGLRL LIDPWLVGPL SFGNQAWFFE ARHKNQWTIP EAIDALILSQ 
GLPDHAHVPT LEQLDRSIPV FASPAAAKVA RKLGFSQVTV LSPGESVTIG NLELQATKGA
PVPQVENGYL LRDRQSGQSL YYEPHGFHDP SVTGPVTAAI APIESLDLPL AGPIIQGAKT
ALELAQRLQL QVLLPTATGG DIESKGILNK IIRGSGSQAE LEAQLSAAGL KTSIFKPSLG
ELQPLPVG