Gene Synpcc7942_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0803 
Symbol 
ID3775981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp796507 
End bp797289 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID637799220 
Producthypothetical protein 
Protein accessionYP_399822 
Protein GI81299614 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.386631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCT ACCTAAAAAT TCTGGCGCTG TTCTGGAGCA CCGCGATCGC GGCGGAACTG 
GAATACCGTC TCAATTTTCT CCTCGCCAGC TTCAGTAGTT TGGGTGGTTT GGCGGGCAGC
TTATTTGGCC TCTTCCTCTT CTATCGTACG GGCTACCGCT TTCAGGGTTG GTCTTGGCCA
GAAGCACAGC TCGTATTGGG CATCTTCACG CTCTTGCAAG GCGCTTCGGC CACACTGTTT
GTGCCCAACC TCAACAAAAT CGTCGAGCAA GTCCAGCAAG GCACCTTAGA TTTCGTGCTG
CTTAAGCCCG TCAGCTCGCA ATTTTGGCTC TCGACCCGCA GCCTTTCGCC TTGGGGCATC
CCTGACTTTC TCTTTGGACT GGTGCTGATT GGCTATGCCG GTCAACAGTT GGGGTTGTCG
CTGCTCGATT ATTTGCAAGG CATTTTGCCG CTGGCCTGTA GCTTGGTGAT TCTCTACAGC
CTTTGGTTCA TGATGGGGTC GCTCAGCATT TGGTTCGTCA AAATCTACAA CGTCACCGAG
GTTCTGCGCG GGCTGGTGGA AGCGGGACGC TATCCGATCA GTGCCTATCC CGCAGGCTTC
CGAATCTTTT TCACCTTCGT TGTGCCGGTT GCCTTTCTCA CGACCTTTCC CGCCGAAGCC
GCCCTCGATC GCCGCCCGTT ATTTTGGCTC TCTGGCGCAG CTTTCCTCGC GATCGCCTTG
CTCTGGCTCT CTAATCGCTT TTGGCGCTTT GCCCTGCGCT TCTACACCAG CGCCTCCAGC
TAA
 
Protein sequence
MGRYLKILAL FWSTAIAAEL EYRLNFLLAS FSSLGGLAGS LFGLFLFYRT GYRFQGWSWP 
EAQLVLGIFT LLQGASATLF VPNLNKIVEQ VQQGTLDFVL LKPVSSQFWL STRSLSPWGI
PDFLFGLVLI GYAGQQLGLS LLDYLQGILP LACSLVILYS LWFMMGSLSI WFVKIYNVTE
VLRGLVEAGR YPISAYPAGF RIFFTFVVPV AFLTTFPAEA ALDRRPLFWL SGAAFLAIAL
LWLSNRFWRF ALRFYTSASS