Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0803 |
Symbol | |
ID | 3775981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 796507 |
End bp | 797289 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799220 |
Product | hypothetical protein |
Protein accession | YP_399822 |
Protein GI | 81299614 |
COG category | [R] General function prediction only |
COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.386631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGCT ACCTAAAAAT TCTGGCGCTG TTCTGGAGCA CCGCGATCGC GGCGGAACTG GAATACCGTC TCAATTTTCT CCTCGCCAGC TTCAGTAGTT TGGGTGGTTT GGCGGGCAGC TTATTTGGCC TCTTCCTCTT CTATCGTACG GGCTACCGCT TTCAGGGTTG GTCTTGGCCA GAAGCACAGC TCGTATTGGG CATCTTCACG CTCTTGCAAG GCGCTTCGGC CACACTGTTT GTGCCCAACC TCAACAAAAT CGTCGAGCAA GTCCAGCAAG GCACCTTAGA TTTCGTGCTG CTTAAGCCCG TCAGCTCGCA ATTTTGGCTC TCGACCCGCA GCCTTTCGCC TTGGGGCATC CCTGACTTTC TCTTTGGACT GGTGCTGATT GGCTATGCCG GTCAACAGTT GGGGTTGTCG CTGCTCGATT ATTTGCAAGG CATTTTGCCG CTGGCCTGTA GCTTGGTGAT TCTCTACAGC CTTTGGTTCA TGATGGGGTC GCTCAGCATT TGGTTCGTCA AAATCTACAA CGTCACCGAG GTTCTGCGCG GGCTGGTGGA AGCGGGACGC TATCCGATCA GTGCCTATCC CGCAGGCTTC CGAATCTTTT TCACCTTCGT TGTGCCGGTT GCCTTTCTCA CGACCTTTCC CGCCGAAGCC GCCCTCGATC GCCGCCCGTT ATTTTGGCTC TCTGGCGCAG CTTTCCTCGC GATCGCCTTG CTCTGGCTCT CTAATCGCTT TTGGCGCTTT GCCCTGCGCT TCTACACCAG CGCCTCCAGC TAA
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Protein sequence | MGRYLKILAL FWSTAIAAEL EYRLNFLLAS FSSLGGLAGS LFGLFLFYRT GYRFQGWSWP EAQLVLGIFT LLQGASATLF VPNLNKIVEQ VQQGTLDFVL LKPVSSQFWL STRSLSPWGI PDFLFGLVLI GYAGQQLGLS LLDYLQGILP LACSLVILYS LWFMMGSLSI WFVKIYNVTE VLRGLVEAGR YPISAYPAGF RIFFTFVVPV AFLTTFPAEA ALDRRPLFWL SGAAFLAIAL LWLSNRFWRF ALRFYTSASS
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