| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0782 |
|---|
| Symbol | |
|---|
| ID | 3775959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 776760 |
|---|
| End bp | 778556 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637799198 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_399801 |
|---|
| Protein GI | 81299593 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.461775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCTC TGTTACGTCG TTGGGATGAT TGGTCACTAC TGAGTCGGCT TTTGCCTTAC
CTCGGTCGCC ACAAGCGGTT ACTGATCGGA TCGTTGATTT TGCTCGTGCC CTTGGCTTTG
GCCGGCGCCG TGCAACCCAT GCTGGTGGGG CAAGCGATCT CGGTTCTACA GAACAAGCCG
ACCTGGGAAA TGCTGCAGGG CATGAGCCGC AGTCAAGGCT TGAACCTACT CTCCTTGGCA
CTGTTGGCCA CGATCGTTGT GCGGCTGGCC TTCCGAGGCG TCCAAGGCTA CTACGTGCAG
GAAGTCGGTC AGCGCGTGAC CGCCGACATT CGCCAAGATT TGTTCCAGCA CGTCACGGCT
CTGGCCGTGC GCTTTTTCGA TCGCACGCCT GTGGGCAAGC TGGTGACACG ACTCACCAAC
GATGTCGAAG CCCTCGGCGA AGTCTTTTCG ACCGGCGCGA TCGGTATTCT CAGCGATATT
GTTTCATTGC TGGCGATCGC GATCGCCATG TTTTGGTTGC AGTGGCAATT GGCGCTGTTG
CTGACCGTTT TATTGCTGCC CACCACGGCT GTCATCCTCT ATTTCCAGCG ACGCTACCGC
AAAGCCAATT ACCGAGCCCG CGAGGAGCTG TCGAACCTCA ACGCCAGCTT GCAGGAAAAC
ATGGTCGGGA TTGGCATTGT CCAAAGCTTC CGCCGCGAAG CCTACAATGC CCAGCAGTTT
CGAGTGGCGA ATCAACGCTA TCTCGAAGCC GTCGATCGCA CGATCTTTCA CGACTCGGCC
ATTTCCGCCA CGCTGGAATG GATCTCGCTG GCTGCGATCG CGGCTGTCCT CTGGTTAGGC
AGCTTTCTGG TATTGCAAGA CCAAATGAAT TTTGGTCTGT TAGCAGCATT TATTCTTTAC
TCGCAGCGGT TGTTTGACCC GTTGCGCCAA CTCGCTGAAA AATTCACCTC GATTCAAGCT
GGATTTACAG CGATCGAGCG AATTGTCGAC ATCTTCAATG AACCAATTGA AATTCGCGAT
GCCGCCCAGA CCCAACAACT GAGCCTTGAA ACCTCACAGT CTGGAGAAAT TCACTTTGAA
AATGTTTGGT TTGGCTACAA GCCCGATGAG CCGGTCATTC AAAACCTCAA CATCACCATT
CAACCCGGTC AAAAGGTTGC ACTAGTGGGG CCGACTGGAG CCGGAAAGAG TACGATTATT
CGCCTGCTCT GTCGCCTCTA TGAGCCAACT CAAGGACGGA TTTTAATTGA CGGCATTGAT
ATCCGAAATC TACCTCAGGT CGAGCTGCGG CGTCACCTAG GCGTCATTCT CCAAGACGGC
TTTCTGTTTG CCGGGGATGT CAGCAGCAAC ATCACGCTGG GAGAGCCCTA CGACCAGGAG
GCGGTGCAGG CAGCAGCGCG TCGCACCAAT GTTGCCACGC TGATTGAATC GCTGCCGCAA
GGCTATGCCA CTCCTTTACG GGAACGCGGG ACAAATTTGT CGGGCGGACA AAGGCAGCTA
TTGGCGTTTG CGCGGGTGGC CATTCGCGAT CCAAAGGTGT TGATTTTGGA TGAGGCGACA
GCGAATTTAG ATGTCGGCAC TGAAGCTCTT GTTCAAGAGG CTTTAGATGA TCTCCTGAGC
GATCGCACCG CAATTATTAT TGCTCACCGG CTCTCGACAA TTCGCAATGC CGATCGCATC
TTAGTCCTCC GCCAAGGACA GCTAATCGAA GATGGATCAC ATGATGTTTT GATGGCTCGC
AACGGACTAT ATACCAGTCT CTATCGACTG CAATCACTGG GAGCAGAAGT AGCCTAG
|
|---|
| Protein sequence | MLALLRRWDD WSLLSRLLPY LGRHKRLLIG SLILLVPLAL AGAVQPMLVG QAISVLQNKP
TWEMLQGMSR SQGLNLLSLA LLATIVVRLA FRGVQGYYVQ EVGQRVTADI RQDLFQHVTA
LAVRFFDRTP VGKLVTRLTN DVEALGEVFS TGAIGILSDI VSLLAIAIAM FWLQWQLALL
LTVLLLPTTA VILYFQRRYR KANYRAREEL SNLNASLQEN MVGIGIVQSF RREAYNAQQF
RVANQRYLEA VDRTIFHDSA ISATLEWISL AAIAAVLWLG SFLVLQDQMN FGLLAAFILY
SQRLFDPLRQ LAEKFTSIQA GFTAIERIVD IFNEPIEIRD AAQTQQLSLE TSQSGEIHFE
NVWFGYKPDE PVIQNLNITI QPGQKVALVG PTGAGKSTII RLLCRLYEPT QGRILIDGID
IRNLPQVELR RHLGVILQDG FLFAGDVSSN ITLGEPYDQE AVQAAARRTN VATLIESLPQ
GYATPLRERG TNLSGGQRQL LAFARVAIRD PKVLILDEAT ANLDVGTEAL VQEALDDLLS
DRTAIIIAHR LSTIRNADRI LVLRQGQLIE DGSHDVLMAR NGLYTSLYRL QSLGAEVA
|
|---|
| |