Gene Synpcc7942_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0712 
Symbol 
ID3775883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp705073 
End bp706350 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content54% 
IMG OID637799125 
ProductC-terminal processing peptidase-2 
Protein accessionYP_399731 
Protein GI81299523 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0280534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTT CTAATCGCAA GCTCATCGCC GGTATTTGTG CTTCTGCGAT CGCGACCGTA 
GCTGTGGTGG GGGCAGGGAA TCACTGGGCG AGGGGGCAAG CGCTCTTTCA AGAAAGCCCA
AAAGAGATCA TTGATGAAGT CTGGCAAGTT GTCGATCGCA ACTACGTTGA TAGCGTTGGC
ACTTTTGATC GCAACAAATG GCGTCAGCTG AGACGCGAAT ATCTTGCCCG GAATTACAAG
ACGCGGGAAG AGGCCTACAG CGCTGTCAAA GAGATGCTGA AGACGCTGGG GGATCCTTAC
ACCCGCTTCA TGGATCCGGA TGAGTTTAAA GACATGCAAA TTGACACTTC GGGTGAACTC
ACCGGGGTGG GAATTCAGCT TAGCCAGGAC CCTGATACAA AAGAGCTGAT CGTTGTTTCA
CCGATCGAAG GTTCTCCGGC TGCTGCGGCA GGCATTCGAT CGCGGGACGT CATCGTCAAA
ATTGACCAAA AGACCACGCA AGGCATGTCT TCCGATGAGG CGGTCAAACT GATCCGTGGC
CCCGTCGGTA GCAAGATCAC GCTGACCATC CGCCGCGAGA AAGAAACGAT CGCCTTCCCG
ATCGTGCGGG AACGGATTGA GATTCACTCC GTGAGTGCCC GCGTTCAAGA GTCGCCAACC
GGCCCCGTCG GCTACATCCG CCTGCGGCAA TTTAGTGCCA ACTCGGCACC AGAAATGCGG
CAAGCCATCA AGGATTTGGA GGCCAAAAAT GTTAAGGGCT ATGTGCTTGA CCTGCGATCC
AATCCAGGCG GGTTGCTCTA CGCGAGCATC GACATTGCTC GGATGTGGCT ACCGAAAGGC
GTAATTGTCT CGACCAAAGA TCGCAGCGGC ATTTCGGAGC AAGCATCGGC GAACAACCGT
GCACTGACCG ATAAGCCTCT CGTCGTTTTG GTGGATGGCG GTTCAGCTAG CGCTAGCGAA
ATCCTCTCTG GTGCTCTGCA AGACAACAAC CGAGCTGTCC TGATTGGTTC CAAGACCTTT
GGTAAAGGTC TTGTGCAATC CGTGCGGCCG CTGGGCGATG GCTCTGGGTT AGCGGTCACG
ATCGCCAAGT ACCTAACCCC CAGTGGTCGG GACATCAATA AGCAGGGAAT CGAGCCCAAT
ATTGTTGCTG AACTGACCGA TGCTCAGCGC GAAGATCTCA GCAAAAATCA GGATCAAATT
GGAACGGCTA GCGATCCTCA ATTCCAATCA GCTCTGAAAG TGCTGACCCA ACAGATTGCA
ACAGCTTCGA ATAAGTAA
 
Protein sequence
MAFSNRKLIA GICASAIATV AVVGAGNHWA RGQALFQESP KEIIDEVWQV VDRNYVDSVG 
TFDRNKWRQL RREYLARNYK TREEAYSAVK EMLKTLGDPY TRFMDPDEFK DMQIDTSGEL
TGVGIQLSQD PDTKELIVVS PIEGSPAAAA GIRSRDVIVK IDQKTTQGMS SDEAVKLIRG
PVGSKITLTI RREKETIAFP IVRERIEIHS VSARVQESPT GPVGYIRLRQ FSANSAPEMR
QAIKDLEAKN VKGYVLDLRS NPGGLLYASI DIARMWLPKG VIVSTKDRSG ISEQASANNR
ALTDKPLVVL VDGGSASASE ILSGALQDNN RAVLIGSKTF GKGLVQSVRP LGDGSGLAVT
IAKYLTPSGR DINKQGIEPN IVAELTDAQR EDLSKNQDQI GTASDPQFQS ALKVLTQQIA
TASNK