Gene Synpcc7942_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0708 
Symbol 
ID3775879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp698708 
End bp700459 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content53% 
IMG OID637799121 
Producthypothetical protein 
Protein accessionYP_399727 
Protein GI81299519 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGTG CGCTCCTCCA GTTTTGGTTG CCGCCTGTGA GTTTTCCCCT TGCTGCCTAC 
GATCGCTACG ATGCCGAGGC GATCACCCGC TACTACCGTC GTCGTCCTTG GTTGGCGATC
GCGCGGCTCA GCGTTATTTT CTGGAACTTC CTAGGGTTTG GCTGGCGACT GTTATGGGAT
CAGCGCCAAC AGGCTGGTGA TGCTCATCTG CCGGAGCGGG CAGCGGAACT ACGACAGATT
CTGACGAACC TAGGACCAAC CTTTATCAAA GCGGGTCAGG CCCTCTCGAC GCGGCCAGAT
TTGGTGCGAG TCGATTTCTT GGATGAACTG ACCAAACTGC AAGACCAGCT GCCCCCTTTT
CCCAATGATC AAGCCTTCGA GATCATGGCA GAGGAACTGG GGCGACCCGT CAGTCAGTCC
TTTGAAGAAC TCTCGCCAGA GCCAATCGCA GCTGCCAGTT TAGGTCAGGT CTATAAAGGC
AAATTGTTCA GTGGCGAAAC GGTCGCAGTT AAAGTCCAGC GCCCTAATCT GCTGCCGACA
ATCACCCTCG ATCTGTTTCT GATTCGCTGG GCTGCAACTT GGTTTGGATC GTTGTTGCCA
CTCAATCTTG GCCACGATTT GACGCTGATT GTCGATGAGT TTGGCTACAA GCTATTCGAG
GAAATTGACT ACGAAAATGA AGGACGTAAT GCGGAACGTT TTGCCGAAAA CTTCCGCGAC
TGTCCCTATG TCAAAGCGCC CAAAATTTAC TGGGCATTTA GCAGCCGTCA TGTGCTGACG
CTGGAATGGA TTGACGGTGT CAAACTCACT GCTGCTGCCG AACTTGACCA GTTGGGTATT
AATGCAGATG CAGTAGTCAA AACTGGTGTT ATTTCCGGTT TGCAGCAACT GCTGGAATTT
GGTTTCTTCC ACGCCGATCC TCACCCGGGC AACCTCTTTG CCCTGCCATC CAGCCCGCGA
CCCGATGGCT TAGGCTGCAT GGCTTACATT GACTTCGGCA TGATGGATCA GCTGGATCAG
TTGACCAAAG AAACCCTAGT CGATGCCGTC GTTCACTTGA TCAATCGTGA TTATGTTGAG
CTGGCGCAGG ACTTTATTAC CCTTGGCTTC CTGACGCCCG ATAGTGATCT CACGCCCATT
ATCCCAGCCT TGGAGTCGGT GCTGGGCGAC ATCATGGGCG AGAAGGTTCG CGACTTCAAC
TTCAAGACGA TTACCGATCG CTTCTCAGAG TTGATGTATG ACTATCCTTT CCGTGTTCCG
GCTAAATTTG CCCTGATCAT TCGATCGCTC GTCACGCAAG AAGGTTTGGC GTTGAGCGTT
AATCCCGACT TCCGCATTGT CGATGTGGCC TATCCCTACA TCGCTAAGCG ACTACTACAG
GGTGAATCGC CGCAGCTCCG TCGTCGTCTC TTGGAAGTGT TGGTCAAAGA TGGCAAATTC
CGCTGGAATC GCCTCGAAAA TCTGATTGCG ATCGCTCAGA ATGACGGCGG TTTTGATCTA
CTGCCGACTG CACAAATGGG TCTGCAATAT CTGTTCTCGG ATGAAGGAGC TTATCTGCGC
AATCAGCTGC TGCTCGCTCT GACTGAGAAT GAGCGCTTGC AAACGGAACC CCTGCAGCGA
CTGTGGGAGC TGCTGCGACC GGAACTGGAA CCTGCCCGAG TGGCAGGCCA TGCCTTTAAT
GCCTTTGTGG CTTTCTCTCG CGATCGCGCT GCGGCTTTCT TCCCTACGCT GGCTCTCGAA
TCCAATCGCT GA
 
Protein sequence
MASALLQFWL PPVSFPLAAY DRYDAEAITR YYRRRPWLAI ARLSVIFWNF LGFGWRLLWD 
QRQQAGDAHL PERAAELRQI LTNLGPTFIK AGQALSTRPD LVRVDFLDEL TKLQDQLPPF
PNDQAFEIMA EELGRPVSQS FEELSPEPIA AASLGQVYKG KLFSGETVAV KVQRPNLLPT
ITLDLFLIRW AATWFGSLLP LNLGHDLTLI VDEFGYKLFE EIDYENEGRN AERFAENFRD
CPYVKAPKIY WAFSSRHVLT LEWIDGVKLT AAAELDQLGI NADAVVKTGV ISGLQQLLEF
GFFHADPHPG NLFALPSSPR PDGLGCMAYI DFGMMDQLDQ LTKETLVDAV VHLINRDYVE
LAQDFITLGF LTPDSDLTPI IPALESVLGD IMGEKVRDFN FKTITDRFSE LMYDYPFRVP
AKFALIIRSL VTQEGLALSV NPDFRIVDVA YPYIAKRLLQ GESPQLRRRL LEVLVKDGKF
RWNRLENLIA IAQNDGGFDL LPTAQMGLQY LFSDEGAYLR NQLLLALTEN ERLQTEPLQR
LWELLRPELE PARVAGHAFN AFVAFSRDRA AAFFPTLALE SNR