Gene Synpcc7942_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0707 
Symbol 
ID3775877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp697172 
End bp698641 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content59% 
IMG OID637799119 
Productarginine decarboxylase 
Protein accessionYP_399726 
Protein GI81299518 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC CGCTCTTTGA CCAACTGCTG GCGAGCGCTC AGCAGGCCCG CGCTCCTTTT 
CACACGCCGG GACACAAGCT CGGGCGGGCG ATCGCAACCC ATCTTCAACA GGCCTGGGGA
TCAGCCATTT TCCAGAGTGA TCTACCCGAG TTACCGGAGT TGGATAATCT CTACGCCGCC
AGCGGGGTTT TAGCCGAGAG TCAAGCCCAA GCAGCGGAGG TGTTTGGGGC CGATCGCAGC
TGGTTTTTGG TCAATGGCTC GACTGGCGGA CTGTTGGCCG CGATTTTGAC CATCTGCAGT
CCCGGCGATC GCCTGCTGTT GCCCCGCAAT GCTCACCGAT CGCTGTTGAG TGGCTGCATT
TTGAGCGGCG CGATGCCGGT TTGGATCACG CCACCGGAGG CGGCAGACTT TGACCTAGTT
GGTGTCCCAA CGCCTGAACA AGTCGCTACA GCACTGGCTC AGGATCCGCA GATCAAAGCA
GTTGTGCTTG TCTCACCGAC CTACGAAGGA GTCTGCGCGG ATGTGGCTGC GATCGCCGCG
ATCGCACACA ATCACAACCT GCCGCTGATT ATTGATGCCG CTCACGGCGC GCATTTGGGC
TTCCATCCTG ACCTCCCGCG ATCGCCCTTA CATGAAGGCG CAGATTTGGT TGTCCAATCA
ACTCACAAGC TACTGGGAGC GTTGACTCAA GCCGCCATGC TGCACTGCAA GGGCGATCGC
ATTGATCCTG AACGGCTCAG CCAATCCTTA GCTCTGGTGC AGAGCAGTAG CCCGAGTTAC
CTCTTGCTAG CCTCGCTGGA AGCGGCAACA GAACAGATGC GAACTTCAGC CCAAGACTTA
CTCCAAGTCA CCATTGATCT CGCTCGCCAA GCCCATCAGC GACTGGCCGA GTTGCCGGGT
CTGCAGTTAC CCGCTCTAAA GATCGGCAAT CGCGAGGGCT TTCCCCAGTG GGACCGAACA
CGGCTGGTGA TCAACTTTCA GTCCTGCGGC TGGAGCGGCT TCTGCGCCGA TGAATATTTG
CACGAGCAAT GGCAAGTTAC GGCGGAGTTG CCCAGCCTCT CGAATCTTGT TTTTCATCTC
AGCTTGGGTA ACCGTATTGA AGACATCGAT CGCCTCGTCA CAGCCTGCGA TCGCCTCCTC
TCTCAGGAAC ATCAAGAGGA ACTGCCACCG CGTCTGCCGG TTTGGCTAGA ACCCGAAACC
ATCCTGAGCC CTCGCCAAGC TTGGTTTTCT CGCCATCAAA CCGTCAGTGC AGAGCAAGCG
ATCGGCGCGA TCGCGGCAGA ATGTGTCTGC CCCTACCCGC CCGGGATTCC CGTTTTGCTG
CCTGGCGAGC GGATTTCGAA GAGCGCAGTA GACTATCTGC GACAGGTACA GACGACCGGC
GGCATTCTCA GCGGCTGCGC TGACCCTGAA CTAACCACCC TGCGCATCGT GCAGGACTCT
GACACGATTC ATGCCTCCTG CCTCTCCTGA
 
Protein sequence
MAKPLFDQLL ASAQQARAPF HTPGHKLGRA IATHLQQAWG SAIFQSDLPE LPELDNLYAA 
SGVLAESQAQ AAEVFGADRS WFLVNGSTGG LLAAILTICS PGDRLLLPRN AHRSLLSGCI
LSGAMPVWIT PPEAADFDLV GVPTPEQVAT ALAQDPQIKA VVLVSPTYEG VCADVAAIAA
IAHNHNLPLI IDAAHGAHLG FHPDLPRSPL HEGADLVVQS THKLLGALTQ AAMLHCKGDR
IDPERLSQSL ALVQSSSPSY LLLASLEAAT EQMRTSAQDL LQVTIDLARQ AHQRLAELPG
LQLPALKIGN REGFPQWDRT RLVINFQSCG WSGFCADEYL HEQWQVTAEL PSLSNLVFHL
SLGNRIEDID RLVTACDRLL SQEHQEELPP RLPVWLEPET ILSPRQAWFS RHQTVSAEQA
IGAIAAECVC PYPPGIPVLL PGERISKSAV DYLRQVQTTG GILSGCADPE LTTLRIVQDS
DTIHASCLS