| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0681 |
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| Symbol | ispD |
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| ID | 3775664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 675164 |
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| End bp | 675862 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799093 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_399700 |
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| Protein GI | 81299492 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATCTGC TGATTCCTGC CGCTGGTTCA GGTCGTCGCT TCGGTGCCGA TCGCAATAAA
CTCCTGCTGC CACTCCTGGG TCAGCCGGTT CTGGCCTGGA CCCTACAAGC CGCCGATCAA
GCTCAGTCGA TCACTTGGAT TGGCATCATT GGGCAGCCAG GCGATCGCGC GGATATTGAA
GCGTTGGTTG ATCAGCTCCA GCTTGCAACC CCTGTCAGCT GGATTCAGGG CGGCCGAGAA
CGCCAGGAAT CGGTGTTTAA TGGCCTGCGA TCGCTGCCCA GTGGGGCTCA GCAAGTTTTA
ATCCATGACG GCGCCCGCTG TTTGGCAACG CCTACCCTCT TCGATCGCTG TAGCGCGGCA
CTCCAGACTT GTCCTGCTTT CGTGGCGGCC GTTCCAGTCA AAGACACGAT CAAACAAGTT
GCTGCTGATG GCACAATCGC CGCAACCCCC GATCGCTCAA CTCTCTGGGC CGCCCAAACT
CCCCAGGGCT TTACCGTTGA GTCGCTGCTG CGTTGCCATC GTCAGGGCCT AGAACAACAG
CTTGCTGTGA CCGATGACGC CGCGCTCCTC GAAGCGTTTG GTTTGCCCGT GCAGATTGTT
GAAGGCGAAG AGACCAATCT CAAGGTGACC ACACCGGCGG ATCTAGCGAT CGCAGAATTA
ATTCTCAAAC AGCGACAGTT TACTGCTGCG ATCGCCTAG
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| Protein sequence | MHLLIPAAGS GRRFGADRNK LLLPLLGQPV LAWTLQAADQ AQSITWIGII GQPGDRADIE
ALVDQLQLAT PVSWIQGGRE RQESVFNGLR SLPSGAQQVL IHDGARCLAT PTLFDRCSAA
LQTCPAFVAA VPVKDTIKQV AADGTIAATP DRSTLWAAQT PQGFTVESLL RCHRQGLEQQ
LAVTDDAALL EAFGLPVQIV EGEETNLKVT TPADLAIAEL ILKQRQFTAA IA
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