| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0656 |
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| Symbol | |
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| ID | 3775639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 651274 |
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| End bp | 652659 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799068 |
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| Product | photosystem II 44 kDa subunit reaction center protein |
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| Protein accession | YP_399675 |
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| Protein GI | 81299467 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast
[TIGR03041] chlorophyll a/b binding light-harvesting protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAACGC TCTCTAGTCC TTCCGTGATC GCAGGCGGCC GGGATATTGA CTCCACCGGT
TACGCTTGGT GGTCCGGCAA TGCCCGTTTG ATCAACCTGT CCGGTAAGCT GCTGGGCGCT
CACGTCGCTC ATGCTGGCTT GATCGTCTTC TGGGCTGGTG CGATGACGCT GTTTGAAGTC
GCGCACTTTG TCCCCGAAAA ACCGATGTAC GAGCAAGGCA TCATCCTGCT CTCGCACTTG
GCGACCCTCG GCTGGGGCGT TGGCCCTGGT GGCGAAGTCG TCGATACCTT CCCCTACTTT
GTGGTTGGGG TTCTGCACCT CATTTCTTCC GCCGTTCTGG GTTTGGGTGG GATCTACCAC
GCCCTGCGCG GCCCTGAGTC GCTGGAAGAG TACAGCACCT TCTTCAGCCA AGACTGGAAA
GACAAGAATC AGATGACCAA CATCATTGGT TATCACCTGA TTCTGCTGGG CTTAGGTGCC
TTCTTGCTGG TCTTTAAGGC CATGTTCTTC GGCGGTGTCT ATGACACCTG GGCGCCGGGT
GGTGGCGATG TCCGCATCAT CTCCAACCCA ACCCTCAACC CGGCTGTGAT CTTCGGCTAC
CTGCTGAAAT CACCCTTTGG TGGCGACGGC TGGATTGTCA GCGTCGACAA CCTTGAAGAC
GTGATTGGCG GCCATATCTG GATTGGTCTG ATCTGCATTT CGGGTGGTAT CTGGCACATC
CTGACCAAGC CTTTTGGCTG GGTGCGTCGC GCCTTCATCT GGAATGGCGA AGCTTACCTC
TCCTACAGCT TGGGTGCCCT GTCGTTGATG GGCTTCATTG CCTCGACGAT GGTTTGGTAC
AACAACACCG TCTATCCTTC CGAGTTCTTT GGCCCGACCG CTGCTGAAGC TTCGCAATCG
CAAGCCTTCA CCTTCTTGGT GCGTGACCAA CGCCTCGGTG CCAACATCGG TTCAGCTCAA
GGCCCGACCG GTCTGGGTAA ATACCTGATG CGCTCTCCTA CCGGCGAGAT CATCTTCGGT
GGCGAAACCA TGCGCTTCTG GGACTTCCGT GGCCCTTGGC TGGAGCCCCT GCGTGGACCG
AATGGTCTGG ATCTCGACAA GCTGACCAAT GACATTCAGC CTTGGCAAGC CCGTCGTGCG
GCTGAGTACA TGACCCACGC ACCGCTGGGT TCGCTGAACT CTGTGGGTGG TGTGGCAACG
GAAATCAACT CGGTGAACTT CGTGTCTCCC CGTGCTTGGT TGGCGACCAG CCACTTCGTC
TTGGCCTTCT TCTTCTTGGT CGGTCACCTC TGGCATGCAG GCCGCGCTCG TGCAGCTGCT
GCAGGCTTTG AGAAAGGTAT CGATCGCGCG ACCGAACCCG TGCTCGCAAT GAGAGACCTC
GACTAA
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| Protein sequence | MVTLSSPSVI AGGRDIDSTG YAWWSGNARL INLSGKLLGA HVAHAGLIVF WAGAMTLFEV
AHFVPEKPMY EQGIILLSHL ATLGWGVGPG GEVVDTFPYF VVGVLHLISS AVLGLGGIYH
ALRGPESLEE YSTFFSQDWK DKNQMTNIIG YHLILLGLGA FLLVFKAMFF GGVYDTWAPG
GGDVRIISNP TLNPAVIFGY LLKSPFGGDG WIVSVDNLED VIGGHIWIGL ICISGGIWHI
LTKPFGWVRR AFIWNGEAYL SYSLGALSLM GFIASTMVWY NNTVYPSEFF GPTAAEASQS
QAFTFLVRDQ RLGANIGSAQ GPTGLGKYLM RSPTGEIIFG GETMRFWDFR GPWLEPLRGP
NGLDLDKLTN DIQPWQARRA AEYMTHAPLG SLNSVGGVAT EINSVNFVSP RAWLATSHFV
LAFFFLVGHL WHAGRARAAA AGFEKGIDRA TEPVLAMRDL D
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