Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0653 |
Symbol | |
ID | 3775636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 648710 |
End bp | 649441 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799065 |
Product | peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_399672 |
Protein GI | 81299464 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATCGC TGATCCAAGT TGCCGCCCAA GGACTCCTGA TCGGTCTGGT GGCCTGGGGC TTAGTTGCCT GCAGTGGCAG TACCACCTCC CTCTCTGCAG CCAATGCCAA TCCTGAGGAC GTGGGACGCC TATACCCCGA CATCCCTCGT CTGGAGGGCA ATGCCACCGT TGTGCTGACG GTCAATAATC AGCCGATCGA GATCGAAGTC CTTGGAAAAG ATGCGCCGCT TACCGCTGGC AATTTTGTTG ACCTCGTCTC TAAAGGAGTT TACGACGGCA CCAGCTTTCA CCGCGTGGTG AAAGAACCGC AGCCCTTTGT GGTTCAAGGT GGCGATCCAC AAAGCAAAGA TCCCAAAGTG CCGGCCCAGC AACTGGGCAC TGGGTCCTAC CAAGATCCCA ATACGAAACA GCCACGCTAC TTACCCTTAG AAATTACGCC TGAGGGCGCA AGCCAGCCGG TCTATAGCCG GACGCTGGAA CAAGCGAGCG TTAGCCGGCC ACCAAAATTG CGGCATCAAC GCGGTGCGGT CGCCATGGCC CGCGCATCCT TCCCTGATTC GGCATCTAGC CAGTTCTACA TCGCACTGTC GGATTTGGGC TTTTTGGATG GAAACTATGC TGTCTTCGGC TATGTCCGCA GCGATATGAC GGTCGTCGAT CGCATCAAAC AGGGCGATCG CATCCAATCA GCTAAGGTCA CAGCAGGTCT GGACAACCTC AAACGCCCAT GA
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Protein sequence | MRSLIQVAAQ GLLIGLVAWG LVACSGSTTS LSAANANPED VGRLYPDIPR LEGNATVVLT VNNQPIEIEV LGKDAPLTAG NFVDLVSKGV YDGTSFHRVV KEPQPFVVQG GDPQSKDPKV PAQQLGTGSY QDPNTKQPRY LPLEITPEGA SQPVYSRTLE QASVSRPPKL RHQRGAVAMA RASFPDSASS QFYIALSDLG FLDGNYAVFG YVRSDMTVVD RIKQGDRIQS AKVTAGLDNL KRP
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