Gene Synpcc7942_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0576 
SymbolthiG 
ID3774814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp557200 
End bp558060 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content60% 
IMG OID637798984 
Productthiazole synthase 
Protein accessionYP_399595 
Protein GI81299387 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.152016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0505529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA GTTGTGCTGA TGCCGAGTTC ATGGTCGCCA CCCCCGACAC CACTGCCGAT 
GTTTTGACGA TCGCCGGACG GTCGTTTCGA TCGCGCCTGA TGACGGGGAC GGGCAAATAC
CGCAGCTTTG AGCAAATGCG CGCCAGCATT GCCGCCAGTG GCTGCGAGAT TGTGACTGTT
GCAGTGCGGC GAGTGCAGAC CAATGCTCCC GGCCATGAAG GCTTGGCCGA GGCTCTGGAC
TGGCAAAAGA TCTGGATGCT ACCGAACACT GCCGGCTGTG CCACGGCAGA GGAAGCAATT
CGGGTCGCCC GCCTCGGGCG GGAAATGGCG AAATTGCTGG GTCAGGAAGA CAACAACTTC
GTCAAGCTGG AAGTCATCCC CGACAGTCGC TATCTGCTGC CCGATCCGAT CGGGACGTTG
CAGGCGGCGG AGCAGTTAGT CAAAGAGGGC TTCGCAGTCT TGCCCTACAT CAATGCCGAT
CCACTGCTTG CCAAGCGCTT AGAAGAAGTG GGCTGCGCAA CGGTGATGCC CCTGGGCTCG
CCGATCGGTT CGGGGCAAGG CATTCGCAAC GAAGCCAACA TTCGCATCAT CGTTGAGAAC
GCGAAGGTTC CCGTTGTTGT TGATGCCGGC ATCGGTACCG CCAGTGAAGC TGCACAGGCG
ATGGAACTAG GAGCCGATGC CCTGCTGATC AATACCGCGA TCGCTCAAGC CGAAGATCCG
GCGCGGATGG CCCAAGCGAT GGCCATGGCC ACGATCGCGG GTCGATTGGC CTTTCAAGCG
GGTCGGATTC CCACGCGATC GGCGGCGATC GCTAGCTCTC CGCAAACAGG CTTGGTCGGG
CAGTCACCAG CCACTGTTTA G
 
Protein sequence
MENSCADAEF MVATPDTTAD VLTIAGRSFR SRLMTGTGKY RSFEQMRASI AASGCEIVTV 
AVRRVQTNAP GHEGLAEALD WQKIWMLPNT AGCATAEEAI RVARLGREMA KLLGQEDNNF
VKLEVIPDSR YLLPDPIGTL QAAEQLVKEG FAVLPYINAD PLLAKRLEEV GCATVMPLGS
PIGSGQGIRN EANIRIIVEN AKVPVVVDAG IGTASEAAQA MELGADALLI NTAIAQAEDP
ARMAQAMAMA TIAGRLAFQA GRIPTRSAAI ASSPQTGLVG QSPATV