Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0576 |
Symbol | thiG |
ID | 3774814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 557200 |
End bp | 558060 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637798984 |
Product | thiazole synthase |
Protein accession | YP_399595 |
Protein GI | 81299387 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.152016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0505529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA GTTGTGCTGA TGCCGAGTTC ATGGTCGCCA CCCCCGACAC CACTGCCGAT GTTTTGACGA TCGCCGGACG GTCGTTTCGA TCGCGCCTGA TGACGGGGAC GGGCAAATAC CGCAGCTTTG AGCAAATGCG CGCCAGCATT GCCGCCAGTG GCTGCGAGAT TGTGACTGTT GCAGTGCGGC GAGTGCAGAC CAATGCTCCC GGCCATGAAG GCTTGGCCGA GGCTCTGGAC TGGCAAAAGA TCTGGATGCT ACCGAACACT GCCGGCTGTG CCACGGCAGA GGAAGCAATT CGGGTCGCCC GCCTCGGGCG GGAAATGGCG AAATTGCTGG GTCAGGAAGA CAACAACTTC GTCAAGCTGG AAGTCATCCC CGACAGTCGC TATCTGCTGC CCGATCCGAT CGGGACGTTG CAGGCGGCGG AGCAGTTAGT CAAAGAGGGC TTCGCAGTCT TGCCCTACAT CAATGCCGAT CCACTGCTTG CCAAGCGCTT AGAAGAAGTG GGCTGCGCAA CGGTGATGCC CCTGGGCTCG CCGATCGGTT CGGGGCAAGG CATTCGCAAC GAAGCCAACA TTCGCATCAT CGTTGAGAAC GCGAAGGTTC CCGTTGTTGT TGATGCCGGC ATCGGTACCG CCAGTGAAGC TGCACAGGCG ATGGAACTAG GAGCCGATGC CCTGCTGATC AATACCGCGA TCGCTCAAGC CGAAGATCCG GCGCGGATGG CCCAAGCGAT GGCCATGGCC ACGATCGCGG GTCGATTGGC CTTTCAAGCG GGTCGGATTC CCACGCGATC GGCGGCGATC GCTAGCTCTC CGCAAACAGG CTTGGTCGGG CAGTCACCAG CCACTGTTTA G
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Protein sequence | MENSCADAEF MVATPDTTAD VLTIAGRSFR SRLMTGTGKY RSFEQMRASI AASGCEIVTV AVRRVQTNAP GHEGLAEALD WQKIWMLPNT AGCATAEEAI RVARLGREMA KLLGQEDNNF VKLEVIPDSR YLLPDPIGTL QAAEQLVKEG FAVLPYINAD PLLAKRLEEV GCATVMPLGS PIGSGQGIRN EANIRIIVEN AKVPVVVDAG IGTASEAAQA MELGADALLI NTAIAQAEDP ARMAQAMAMA TIAGRLAFQA GRIPTRSAAI ASSPQTGLVG QSPATV
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