Gene Synpcc7942_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0572 
Symbol 
ID3774810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp554694 
End bp555134 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content57% 
IMG OID637798980 
Producthypothetical protein 
Protein accessionYP_399591 
Protein GI81299383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.985503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0152096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG CCCGTTCTCA AGGCTGGCTG AGGGGCGTCC ACCACGTTGC GCTACATGTG 
CAAGATCTAG CGCGATCGCG GCAGTTTTAC GGCGAGATTT TAGGACTAGC GGAGCTGACA
GATGATCAGG TTCCTAGTAC GCTGCGACCG CTGGTTGAGG CCGGTCAGGT TGCCAACTTT
CGGCTACCAG ATGGCGTGAT TTTGGACCTG TTCGCAGCAC CAAAACTGCA GCCGCCTGAC
CCCGACCCTA GCCAAGAATT TACCCGCTTT GCCCATCTGG CCTTCGACAT TGCGCCCGAG
CAATTTGATG CGGCCGTGCA AATTCTCCAA GAGCAGAATG TCGCGATCGC CCAAGGGCCA
GTCAGCCGTC CGACCGGTCG CGGTGTCTAT TTTTACGACC CTGATGGCAC CCTGTTAGAA
ATTCGCTGCG ACCCTTCATG A
 
Protein sequence
MAIARSQGWL RGVHHVALHV QDLARSRQFY GEILGLAELT DDQVPSTLRP LVEAGQVANF 
RLPDGVILDL FAAPKLQPPD PDPSQEFTRF AHLAFDIAPE QFDAAVQILQ EQNVAIAQGP
VSRPTGRGVY FYDPDGTLLE IRCDPS