| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0559 |
|---|
| Symbol | hslO |
|---|
| ID | 3774797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 540349 |
|---|
| End bp | 541242 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637798967 |
|---|
| Product | Hsp33-like chaperonin |
|---|
| Protein accession | YP_399578 |
|---|
| Protein GI | 81299370 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.136601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.555659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACC AACTGATTCG AGCGACTGCA GCAGGTGGTG GCATTCGTGC CGTCGGCGTG
ATCACCACTG ATCTCACTGC CGAGGCTCAG CGTAAACACG GTCTGTCGTT TGTGGCGACC
ACGGCCCTGG GGCGCAGCAT GGCAGCGGGA CTGCTCCTGG CCTCCAGCAT GAAAAAAGAA
GGTTCACGGG TCAATTTGCG GATTCGCAGC GCTGGCCCCC TCGGGGGGTT GATGGTCGAT
GCTGGCTTAG ATGGCACCGT GCGCGGCTAT GTGGAACATC CCGCGATTGA AATTGAGCCC
AACACCCAAG GATTACCCGA TGTCGGCCGC GCCATTGGCC CCGGCTACCT GCATGTGATG
CGAGATGTCG GCTACGGTCA GCCCTACACC AGTACTGTCG AGCTGGTCAA CGGCGAAATT
GGCGACGATG TAGCCTACTA CTTGGCCAGC TCTGAGCAAA CACCTTCAGC GATTCTGCTA
GGGGTTTATC TTGATCGCCA AGGGGTCGAA GCCGCCGGTG GGCTATTGAT TCAAGTGCTG
CCCCAAGCCG CTCGCGATCC AGAGCTGGTC AGCTTGCTGG AATCGCGGAT CAGCCATCTG
AAAGGCTTCA CGCAACTCCT ACGATCGGGC AAGGATTTGC CAGAGATTCT GGAAGACCTG
CTGGGCGACT TGGATCTGAC AATTCTGGCC GAACCACGAT CGCTGCGGTT TTTCTGCCCC
TGTACCCACC AACGGATGCT AGGCGCTCTC AAAATCTTTG GGGCACCGGA ACTGCGCGAC
ATGATCGCCA AGGATCAAGG GGCCGAGGCA ACCTGCGAGT TTTGTAGCGA GGTCTATCAA
GCCAGCATTG AAGAGCTGGA AGAACTGATC AGCGACTTGG AAACCGCCGC TTAA
|
|---|
| Protein sequence | MADQLIRATA AGGGIRAVGV ITTDLTAEAQ RKHGLSFVAT TALGRSMAAG LLLASSMKKE
GSRVNLRIRS AGPLGGLMVD AGLDGTVRGY VEHPAIEIEP NTQGLPDVGR AIGPGYLHVM
RDVGYGQPYT STVELVNGEI GDDVAYYLAS SEQTPSAILL GVYLDRQGVE AAGGLLIQVL
PQAARDPELV SLLESRISHL KGFTQLLRSG KDLPEILEDL LGDLDLTILA EPRSLRFFCP
CTHQRMLGAL KIFGAPELRD MIAKDQGAEA TCEFCSEVYQ ASIEELEELI SDLETAA
|
|---|
| |