Gene Synpcc7942_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0549 
Symbol 
ID3774787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp531884 
End bp532645 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID637798957 
Producthypothetical protein 
Protein accessionYP_399568 
Protein GI81299360 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCTG CTTCGGCAAT CGCCCCCACC ATGCTCACTG AATTCATCGG AACTCCTCAC 
TTCAGTAGTG ACTTGCTGTT ACTGCTGCCG TTGCTCGTAG TTTTGGAAGC CGTCTTGTCT
GCGGACAATG CGGTGGCTTT AGCTGCGATC GCGCGCGGGC TCGAGAATCC TGAGCAGCAA
CGCAAAGCCC TTAACCTCGG CCTTGTGGTT GCCTACATCC TGCGAATGCT ATTGATTTTG
ACAGCCTCGT GGGTCACGCA ATTTCGACTG GCGGAGTTGG CGGGTGCCCT GTATCTGTTG
TGGCTTGCAT TTAACTACTT TCGGCCTGAC GGTAGTGATA CCGAGGGAGA AAAACACCAT
CACCGCTTCA CGAGTCTTTG GGCATCAATT CCCACGATCG CACTGACCGA TTTGGCCTTC
TCCCTGGATA GTGTGACCAC TGCGATCGCC GTTTCGCGGG AAACCTGGTT GGTGTTGTTG
GGCGGCACGA TTGGCGTGAT CACCCTCCGA TTCCTCGCGG GCCTCTTCAT CCGCTGGCTG
AAGGAATACG ACAACCTAGA ATCAGCGGGC TATGGTGCCG TGGCGCTGGT GGGCTTGCGG
TTGCTCGTGC GCGCGATCAA CGAATCCTTG ACTCCCCCAG AATGGGTGAT GGTCAGCTGT
ATTGTCGTGT TATTCATCTG GGGTTTTTCC AAAAAGACCC TGCCCCTCGC TGCTGAATCC
GAGGAAACCG TAGAAGTTAC GAAAGATCCC CTCAGCCTTT AA
 
Protein sequence
MLAASAIAPT MLTEFIGTPH FSSDLLLLLP LLVVLEAVLS ADNAVALAAI ARGLENPEQQ 
RKALNLGLVV AYILRMLLIL TASWVTQFRL AELAGALYLL WLAFNYFRPD GSDTEGEKHH
HRFTSLWASI PTIALTDLAF SLDSVTTAIA VSRETWLVLL GGTIGVITLR FLAGLFIRWL
KEYDNLESAG YGAVALVGLR LLVRAINESL TPPEWVMVSC IVVLFIWGFS KKTLPLAAES
EETVEVTKDP LSL