Gene Synpcc7942_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0502 
Symbol 
ID3774740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp489508 
End bp490074 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content58% 
IMG OID637798909 
Producthypothetical protein 
Protein accessionYP_399521 
Protein GI81299313 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCTG CGATCGCTGA ACTCAACACC GATCGCCTCC GCCTGCGAGC TTGGCAAGAA 
AGCGATCGCG AACCCTTTGC GGTGCTCAAT GCCGATCCAG GGGTGATGGA GCATTTCCCT
GCCTGTCTGA GTCGGGCTGA AAGTGATGAC CTCGTCGATC GCATCGAAGC GCATTGGCAG
CAGTGGGGGT TTGGCCTCTG GGCAGTTGAA CAAAAGAGCG ATCGCGCCTT CATTGGGTTT
ATTGGCCTCA AGACTGTGCC CTTTGAAGCA GACTTCACAC CAGCGGTGGA GATTGCTTGG
CGGTTGGCGC AACCCTACTG GGGGCAAGGA TTCGCTTCCG AAGGAGCGAA GGCTACTTTG
CAATTTGGCT TTGAGCAGCT TCAGCTCGAC ACGATTGTTA GCTTCACCGC CGTCTGTAAC
CAGCGATCGC AACGGCTGAT GCAACGGTTA GGGCTGCAGC AGGTGGGGAC GTTCGAACAT
CCCGCCTTAC CCGAGGGCGA TCGCCTGCGG ACACATGTCT TGTATCGGGG CGATCGCCAG
CAATGGCAGG CTGGCCTTCT AGGCTAG
 
Protein sequence
MQSAIAELNT DRLRLRAWQE SDREPFAVLN ADPGVMEHFP ACLSRAESDD LVDRIEAHWQ 
QWGFGLWAVE QKSDRAFIGF IGLKTVPFEA DFTPAVEIAW RLAQPYWGQG FASEGAKATL
QFGFEQLQLD TIVSFTAVCN QRSQRLMQRL GLQQVGTFEH PALPEGDRLR THVLYRGDRQ
QWQAGLLG