Gene Synpcc7942_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0485 
Symbol 
ID3774723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp470975 
End bp472312 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content59% 
IMG OID637798892 
Productphosphoglycerate mutase 
Protein accessionYP_399504 
Protein GI81299296 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.081071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACGC GTGTTGTCCT CGTCCGCCAC GGACAAAGCA GCTATAACGC CGCTGGGCGT 
ATCCAAGGAC GCTGCGACAA TTCTCAGCTG ACCGATCGCG GGGCCGCCGA TGCGGTCAAG
GTTGCGGCAG CCCTGAACGG CATTCCCTTT GCGGCGGCTT ACTGCAGCCC GCTGCAGCGG
GCCAAGCGCA CCGCTGAAAT CATCATTGAA CAAATCGAGA CCCCGCCGGC GCTAGCGGTC
AGCGATGGCT TGCTGGAAGT CGACCTACCC CTTTGGGAAG GACTGAGTCG CGAGGAAGTG
CGATCGCAGT ACGCTGAACT CTACCGCCAG TGGCATGAAG CGCCCCACGA GTTAGTGCTG
ACGGTGCCCG ATGGTCAGGG TGGCAGTCGG GAGCATGCGC CGGTTTTGGC ACTGTTTGAA
CAAGCTCGGC AGTTCTGGAA GGACTTGCTC GAGCGCCATC GCGATCAAAC CGTGCTGCTC
GTCGCCCACA ACGGCATTTT GCGATCGCTG ATTGCGACAG CGCTGGGGGT CGATCCCTCT
GCTTACCAGG TTATTCGCCA GTCCAACTGC GGCATCAGTG TCCTCAACTT TGCGGATGGA
ACGAATCAGC CGGCCCAACT GGAATGTTTG AACCTGACGG CTCCCCTAGG TGATGCCCTA
CCCGATCGCG GGGCCAGTAG CGGCGTTCGG TTGCTGCTGG TTCGCCATGG TGAAACCGAC
TGGAACCGCC AGAAACGCTT CCAAGGTCAA ATCGATATTC CGCTCAATGA CAACGGCCGT
GCCCAGGCGC GCTCGGCGGC AGAATTCCTT GCGCCGATTC AGATTGATTT CGCCGTCAGC
AGTCCGATGG CTCGCCCCAA AGAAACAGCG GAACTGATTC TTGAACGTCA TCCCAACTGC
GAACTATCGG TAGACGATCG CTTGCAGGAA ATTGGCCATG GCCTTTGGGA AGGCAAGCTT
GAAGAAGAAA TTGCGGCGGA GTTTGGCGAG CTGTTGCAGC TCTGGAAGGA CCAGCCCGAG
CAAGTCCAGA TGCCCGAAGG TGAAAACCTA CAGGAAGTCT GGGATCGTTC TGTCGCAGCT
TGGGAGGCGA TCGTTGCTAA TGCGCCAGAA GGTAGTACAG GACTCGTTGT GGCCCACGAC
GCGGTCAACA AAGTCATCCT CTGCCATGTC CTCGGCCTCT CGCCAGCAGA TATTTGGTCA
ATCAAGCAGG GTAACGGCGC AGTCACCGTT GTTGACTATC CGAAGCGGCT TGATTCGCGC
CCAGTGCTGC AAGCGATGAA CTTGACCCTG CATTTGGATG GGGCAGTGCT CGATCGCACG
GCAGCAGGAG CCCTCTAG
 
Protein sequence
MATRVVLVRH GQSSYNAAGR IQGRCDNSQL TDRGAADAVK VAAALNGIPF AAAYCSPLQR 
AKRTAEIIIE QIETPPALAV SDGLLEVDLP LWEGLSREEV RSQYAELYRQ WHEAPHELVL
TVPDGQGGSR EHAPVLALFE QARQFWKDLL ERHRDQTVLL VAHNGILRSL IATALGVDPS
AYQVIRQSNC GISVLNFADG TNQPAQLECL NLTAPLGDAL PDRGASSGVR LLLVRHGETD
WNRQKRFQGQ IDIPLNDNGR AQARSAAEFL APIQIDFAVS SPMARPKETA ELILERHPNC
ELSVDDRLQE IGHGLWEGKL EEEIAAEFGE LLQLWKDQPE QVQMPEGENL QEVWDRSVAA
WEAIVANAPE GSTGLVVAHD AVNKVILCHV LGLSPADIWS IKQGNGAVTV VDYPKRLDSR
PVLQAMNLTL HLDGAVLDRT AAGAL