Gene Synpcc7942_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0477 
Symbol 
ID3773423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp460994 
End bp461293 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content49% 
IMG OID637798884 
Producthypothetical protein 
Protein accessionYP_399496 
Protein GI81299288 
COG category[S] Function unknown 
COG ID[COG0762] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGTT CTTCGCTTGG TCTACTGCTC AACACGCTTT CAATCACCCT CAACATCTAC 
TTTGTCCTGC TGATCATCCG CGTCTTACTG AGCTGGTTCC CTAACTTTCA GAGCAGTCAG
TTCATGCTGA TTTTGGGTCA ACTCACCGAT CCCTATTTGA ATCTGTTCCG GCGCGTCATT
CCGCCCTTGG GTGGCATGGA CTTTTCACCG ATTTTGGCCT TTTTCATCTT GCAAGCCGTG
ACCCAAGCCG TTCAACAGCT TGCCGTCCAA ACCTCGGGCA GTTTTTCGGC TTTTTACTAA
 
Protein sequence
MMSSSLGLLL NTLSITLNIY FVLLIIRVLL SWFPNFQSSQ FMLILGQLTD PYLNLFRRVI 
PPLGGMDFSP ILAFFILQAV TQAVQQLAVQ TSGSFSAFY