Gene Synpcc7942_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0471 
Symbol 
ID3773417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp457882 
End bp458712 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content56% 
IMG OID637798878 
ProductABC-type sugar transport system permease component-like 
Protein accessionYP_399490 
Protein GI81299282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCTCT CTGCTGGATT CCGATCGCTT CTGCTCTACC TGCTGCTGGG GACGATCGCG 
GTGGCGATGT TGATCCCGCT CCTCTGGCTG GTCAGCACGG CTTTCAAGTC AGCTGGTGAG
GATATTTTTC AGTTTCCGCC ACAGTTTCTG CCCACCCAAC CGACGCTCGA TAACTTCCGC
CGCGTCTGGA CTGAGAATCC GCTGGGGCAA TACTTCCTTA ACAGCACCTG GGTGGCTCTG
TTGACGGTGG GACTTAATCT GCTGTTTTGC TCCCTGGCCG CTTATCCCTT GGCGCGATTG
GAATTTAAAG GGCGGCAAAC TTTGTTTCTG CTGATTGTGG CAACCATCCT GATTCCCTTT
CAGGTGGTGA TGATTCCGCT CTACGTACTG ATCATCAATC TTGGCCTGCG CAACACCTAC
CTTGGCTTGG TCTTCCCTTA TTTGGCTTCG GCCTTTGGCA TTTTTCTGTT GCGCCAAGCC
TTTCAAGGAA TCCCCAAAGA CTTGGAAGAG GCCGCACGCA TCGATGGCTG CAATGACTTG
GGCGTCTGGT GGAATGTGAT GATTCCGTCG GCGCGGCCTG CACTGATTAC GCTGGCGATC
TTCGTGTTCA TCGGCTCTTG GAGTGACTTC CTCTGGCCGC TGATCATTTT GGATGAGCCC
GATCGCTACA CCTTGCCCTT GGGGATCGCG ACCCTCGCCA GCGGCTTCTC CCTCGATTGG
CGATTGGTAG CGGCGGGTTC AGTGTTGTCG ATTTTGCCGG TCTTTGGCGT TTTCTTGGCG
CTGCAGCGCT ACATTGTGCC TTCGGCGGCT GCCAGTGGTG TGAAGGGATA A
 
Protein sequence
MRLSAGFRSL LLYLLLGTIA VAMLIPLLWL VSTAFKSAGE DIFQFPPQFL PTQPTLDNFR 
RVWTENPLGQ YFLNSTWVAL LTVGLNLLFC SLAAYPLARL EFKGRQTLFL LIVATILIPF
QVVMIPLYVL IINLGLRNTY LGLVFPYLAS AFGIFLLRQA FQGIPKDLEE AARIDGCNDL
GVWWNVMIPS ARPALITLAI FVFIGSWSDF LWPLIILDEP DRYTLPLGIA TLASGFSLDW
RLVAAGSVLS ILPVFGVFLA LQRYIVPSAA ASGVKG