Gene Synpcc7942_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0455 
Symboltgt 
ID3773401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp444001 
End bp445155 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content58% 
IMG OID637798862 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_399474 
Protein GI81299266 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGGC AGTGCGCGGT GGCTTCATTG ACAGCGTTTC AGTTCCAAAT CGATCGACAG 
TGCAGCCAAA CACGGGGCCG AGCTTGCAGC TTTCACACGC CCCACGGGAT TGTTGAAACC
CCGCGCTTTA TGCCGGTGGG GACGTTGGCT ACGGTCAAAA CTGTAACGCC TGCCCAACTG
CGCGATACCG GCGCTCAGAT GGTGCTGTCC AACACCTACC ACCTGCATTT GCAACCAGGC
GAAGAGATTG TGGCCAAAGC GGGCGGTCTG CACCGCTTCA TGAATTGGTC GGGGCCAATG
CTGACTGATT CCGGTGGCTT TCAGGTCTTC AGCCTGAGTG AACTGCGCAA GATTGAAGAG
CGCGGCGTCA CCTTTCGATC GCCCCGGGAT GGCGCGGTGA TTGAGTTCAC CCCCGAGCGA
TCGATTCGCA TTCAAAATGC ACTGGGGGCC GATGTGATCA TGGCCTTCGA TGAATGCCCG
CCCTATCCAG CTGAGCGCAA GGACGTCGAA GCGGCGGTGG CACGGACCTA TCGCTGGCTG
GAGCGCTGTA TCAACGCTCA TGAAAGACCC CAGGATCAAG CCCTATTCGG CATTGTTCAA
GGCGGCGTCT ATCTGGATTT ACGCCAGCAG GCGGCCCGGG ATCTCGTTCA GCTTGACCTA
CCGGGCTATG CGATCGGTGG TGTCAGTGTC GGCGAACCCT CAGAAGAAAT TCACCGCATT
GTGGAAGCGA CAGCACCGCT CTTGCCCGCC CATAAACCTC GCTACTTGAT GGGTGTGGGG
ACGTACCGCG AAATGGTGCA GGCGATCGCC GCTGGGATTG ACCTGTTTGA CTGCGTGATC
CCAACTCGTT TGGCGCGGCA TGGTGCTGCC TTAGTCAAGG GCGATCGCTG GAACCTGAAA
AATGCACAGT TCCGCGAAGA TTTCCAGCCG CTGGATGAAG ACTGTAACTG CTACTGCTGC
CAAAACTTCA GCCGCGCTTA CCTCAACCAC CTGATTCGAT CGCGGGAAAT TCTGGGCTAT
ACCTTGCTCT CGATTCACAA CATCACCGAG CTGGTGCGCT TCACGACTCG GATTCGCGAG
GCTATCTTGA GCGATCGCTT CGTCGAAGAG TTTGGCCATT GGTTACAGCC ATCCGCAGTG
CCCGTATCGC CGTGA
 
Protein sequence
MDRQCAVASL TAFQFQIDRQ CSQTRGRACS FHTPHGIVET PRFMPVGTLA TVKTVTPAQL 
RDTGAQMVLS NTYHLHLQPG EEIVAKAGGL HRFMNWSGPM LTDSGGFQVF SLSELRKIEE
RGVTFRSPRD GAVIEFTPER SIRIQNALGA DVIMAFDECP PYPAERKDVE AAVARTYRWL
ERCINAHERP QDQALFGIVQ GGVYLDLRQQ AARDLVQLDL PGYAIGGVSV GEPSEEIHRI
VEATAPLLPA HKPRYLMGVG TYREMVQAIA AGIDLFDCVI PTRLARHGAA LVKGDRWNLK
NAQFREDFQP LDEDCNCYCC QNFSRAYLNH LIRSREILGY TLLSIHNITE LVRFTTRIRE
AILSDRFVEE FGHWLQPSAV PVSP