| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0441 |
|---|
| Symbol | |
|---|
| ID | 3773386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 430523 |
|---|
| End bp | 431191 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637798847 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
|---|
| Protein accession | YP_399460 |
|---|
| Protein GI | 81299252 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.135229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATAT TCGTCAGCAG GGTAGGAGCA GCGGTCATCA TCGGTCTGCA TGTAACGGCC
GACCCAGCAA CTCAGGCCGA TCGCCCCAAT CTTACGTCAG TGACCATGTC TTCTCCTGTT
CCTGCTGCAC CCTCTGCGCT CACCCAGCCT GCCGTTGGCA TCATCATGGG CAGCGACTCT
GATTTACCCA CCATGCGTGG CGCGATCGCC ATCTGCCAGC AGTTTGGCAT TGCCCACGAG
GTCGAAATTG TCTCCGCTCA CCGTACTCCG GTGCGGATGG TGGAGTACGC CCAAACAGCC
CATCAGCGCA GCCTCAAGGT GATCATTGCC GGCGCAGGCG GTGCGGCCCA TTTACCGGGC
ATGGTGGCTG CCCTAACTCC CCTGCCGGTG ATTGGCGTAC CTGTGCAGAC CCGCACGTTG
CAGGGAGTGG ACTCGCTCTA TTCGATCGTG CAAATGCCGG CTGGCATCCC AGTAGCAACC
GTCGCGATCG GTAATGCCAC CAATGCAGGG CTCCTAGCAG TGCAAATGCT GGCTAGCCAC
AACCCCGAAC TACTCCAAGC GGTGCAGACC TATCGCCAAG AATTGGCGCA AATGGTGCAA
GATAAGCAGA CTCGCCTCAG TGCGATCGGT GTTGAGGCCT ACCTCGAAAA TGCTGGTGGT
CATCACTAG
|
|---|
| Protein sequence | MRIFVSRVGA AVIIGLHVTA DPATQADRPN LTSVTMSSPV PAAPSALTQP AVGIIMGSDS
DLPTMRGAIA ICQQFGIAHE VEIVSAHRTP VRMVEYAQTA HQRSLKVIIA GAGGAAHLPG
MVAALTPLPV IGVPVQTRTL QGVDSLYSIV QMPAGIPVAT VAIGNATNAG LLAVQMLASH
NPELLQAVQT YRQELAQMVQ DKQTRLSAIG VEAYLENAGG HH
|
|---|
| |