Gene Synpcc7942_0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0434 
Symbol 
ID3773379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp425057 
End bp426064 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content55% 
IMG OID637798840 
Producthypothetical protein 
Protein accessionYP_399453 
Protein GI81299245 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.313959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT TCTACAACGC CTTTACCCTG TTCCTGAGTT TGTTGGTAGA GGCTTTACCG 
TTTTTGTTGC TGGGGGTCTT TCTCTCAAGT TTGCTGCTCT GTTTTACCAA CGAGAAAGCC
CTGCTGCGGA TTTTGCCTAA GAATCCTTTG GGGGGGGCTT TAGCGGGCAG TCTTGTCGGA
TTCCTCTTTC CGGCTTGTGA GTGTGGCAAT GTCCCTGTGA CTCGCCGCCT CATTCTTCAA
GGAGCTCCGC CGGCGGTCGC GATGGGTTTT TTGCTCGCAG CACCGGTGAT TAACCCGATT
GTGATTTGGT CAACGTGGGT GGCCTTTCGC GATCAGCCCG AAATTGTGGT GTTGCGGGTT
TTGTTCACGA TGATTATTGC CACGTTGGTG GGTTGGGTGT TCAGTGCCCA AAAGGATTTG
CGTCCCATTC TGCAGCGCCG CACCGCAGAC TTATTGGAGT TGACTTGTCC GCGTCCCACT
AATGACCAAC CGGCCTTGCT CCAGCGCGGT ACCTTCTTTT TGGGGCAGGG CAGTCAGCCT
GCGGCCTCGA TCGCGTTGGA AAGTGCGATC GTCAGTGAAC TAGCGGTTCC GGCTGGCTTG
TGGCCAAAGC TAAGCCTCGC CTTGGACAAC ACGCTGCAGG AACTGCGTGA TCTAGGGGGC
GTTCTGATTT TGGGGAGTGC CGTTGCTGCC CTGATTCAGA CCTTTGCACC CCGCGAGTTA
ATCCTGAGCC TCGGGCAAGG CCCTGTCACT TCGGTGATCG CCATGCTGGT GCTGGGAACG
GTGGTTTCGA TCTGCTCGAC GGTAGATGCT TTTTTTGCCC TTGCTTTCGC AAGCGTCTTT
ACGAGTGGTG CGCTTTTAGC CTTTCTCGTG CTGGGTCCAA TGGTCGACCT CAAGGGCATT
GGTATGCTGC TGACGGTGTT TCGCCCGAGG GCAGTGATCT ATCTCTTTGG ACTTACGACG
GTGATGACCT TTTTGCTCTG CCTCGCAGTC AACTTTTACT TGAATTGA
 
Protein sequence
MTRFYNAFTL FLSLLVEALP FLLLGVFLSS LLLCFTNEKA LLRILPKNPL GGALAGSLVG 
FLFPACECGN VPVTRRLILQ GAPPAVAMGF LLAAPVINPI VIWSTWVAFR DQPEIVVLRV
LFTMIIATLV GWVFSAQKDL RPILQRRTAD LLELTCPRPT NDQPALLQRG TFFLGQGSQP
AASIALESAI VSELAVPAGL WPKLSLALDN TLQELRDLGG VLILGSAVAA LIQTFAPREL
ILSLGQGPVT SVIAMLVLGT VVSICSTVDA FFALAFASVF TSGALLAFLV LGPMVDLKGI
GMLLTVFRPR AVIYLFGLTT VMTFLLCLAV NFYLN