Gene Synpcc7942_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0388 
Symbol 
ID3774909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp380870 
End bp381991 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content56% 
IMG OID637798794 
Productglycosyltransferase 
Protein accessionYP_399407 
Protein GI81299199 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.230246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCT ACCCGACAAC AGCAGCTTCC ATCGGAGGAC TCGTTCCGGC CTCTTCTGAT 
CTGCTGATCA ATTTGGCCTA TCTCAATCAA GAGGCTACGG GCTTAAGTCA CTACGGTCTG
CAACTAGTTC CCCACCTAAT TCGGATTTTG CATCCGGTCT TGCTCTCGCC CTGCAGATGG
CCAGGGGCAA CAACCCTGCA GATTCCCAAC AATATGACAG CGATCCAAGG TCTGCAGGGA
CATCTGCGAC GGCTCATTTG GACACAGACC CAACTCGGGC AGATCTATCA CCAGATAGGC
AGCCGGCTAC TGTTTTCTCC AGTACCAGAA GCGCCGCTAG GACAATCGAT CCGCAAGGTG
ATCACGGTGC ATGATCTCAT CCCCCTGCGA TTCCCCAGCC GTTCCTTCTC CACACTGTAT
TTCCGCAGTC ATCTACCAAG GCTACTTAAA GAATCAACCC ACATTTTTTG CAATTCCCAA
GCCACAGCGC AGGATCTTCA GTCTTTTTAT CAGGTGCCAG AACAGCGTTT GACGATCACG
CCTCTCGCCT GCGATCGCCA ACAGTTTCGG CCGCTGCGCC TCGACCGCCG CAACTATTTT
GTCTATGTAG GCCGGCTCAA TCCCTACAAG AACCTCCAAC GATTGATCAA GGCCTTTGCC
CTGATCCAGC GGCAATTAGA CTGCGAACTC TGGCTGGTCG GCCCCGTTGA TCGCCGTTTT
CTGCCAGCAG TGCAGGCCCA GATTGAAGCT CAGGGGCTGA CTGAGGTGGT GCGGTTCAAA
AACTATGTCC CCCGGAAAGA GCTACCGATC ATCCTCAACC AAGCGATCGC CCTCGTTCAT
CCCAGCCTCT GGGAAGGCTT TGGCCTGACC GTTTTAGAGG CCATGTCCTG TGGAACTCCC
GTGCTTGTCG CCGATCGTTC CTCCTTGCCC GAAGTGGTGG GGGATGCCGG TCTGTACTTC
GACCCGCTGC AACCGGAAGC GATCGCTGAA TCCATGCAGG CGATTGCTCA AGACTCGGGG
CTACAGCAAC GGCTCAGTGC TGCCGCTCTA GCGCGATCGC AGCAGTTCTC TTGGGAGCGG
ACTAGCCGGA TTACGATTCA GCAGTTGCAG GCCTTGCTCT GA
 
Protein sequence
MPTYPTTAAS IGGLVPASSD LLINLAYLNQ EATGLSHYGL QLVPHLIRIL HPVLLSPCRW 
PGATTLQIPN NMTAIQGLQG HLRRLIWTQT QLGQIYHQIG SRLLFSPVPE APLGQSIRKV
ITVHDLIPLR FPSRSFSTLY FRSHLPRLLK ESTHIFCNSQ ATAQDLQSFY QVPEQRLTIT
PLACDRQQFR PLRLDRRNYF VYVGRLNPYK NLQRLIKAFA LIQRQLDCEL WLVGPVDRRF
LPAVQAQIEA QGLTEVVRFK NYVPRKELPI ILNQAIALVH PSLWEGFGLT VLEAMSCGTP
VLVADRSSLP EVVGDAGLYF DPLQPEAIAE SMQAIAQDSG LQQRLSAAAL ARSQQFSWER
TSRITIQQLQ ALL