Gene Synpcc7942_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0371 
Symbol 
ID3774892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp365116 
End bp366015 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content53% 
IMG OID637798777 
Producthomoserine O-succinyltransferase 
Protein accessionYP_399390 
Protein GI81299182 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.473501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA TCATTCCGCA AGATCTGCCT GCTCGTCGCA TTCTGGATGC TGAGTCCGTA 
TTCACGCTGG GGGATGCGGA TGCGCGGCGG CAGGATATCC GCGCTTTGCA AGTGGTTGTT
TTGAACCTAA TGCCGACCAA GGTGACAACC GAAACGCAGA TTGCTCGGGT ACTCGCCAAT
ACGCCGCTAC AAGTAGAACT CACTTTAATT CACACGGCTA GCTATCAACC AACCCACACC
GACCCCGAGC ATCTTCGTAA CTTCTACAGC ACCTTTGATC AAATTCGCGA TCGCCAGTTT
GATGGCTTGA TTGTGACGGG CGCGCCGGTG GAAACCCTGC CTTGGCTGGC GGTGGACTAC
TGGTCGGAAC TGACGACTAT TCTGGATTGG AGTCGTGAGG CGGTGCGCTC CAGTTTGTTC
ATCTGCTGGG GAGCCCAAGC CGCGCTTCAG CATTTTCATG GCATTGAAAA GCAAACCTTG
CCAGCCAAGC GCTTTGGCGT TTTTTGGCAT CATCTCCGCG ATCGCAGTTC TCCCTTGGTA
CGCGGCCACG ATGATGATTT TCTGGTGCCG GTCAGTCGCC ATACGGAGGT AATTGCGGCT
GAGGTATTGG CTCAATCACA GTTGCAAATT CTGGCAGAAA GCTCAGAGGC TGGACTCCAT
CTCCTCTGGG ATGCAGACCA ACATCGCACC TATCTGTTCA ACCATCCGGA ATACGATGCA
GACACCCTCG ATCGCGAATA TCGACGCGAT CGCGAGAAAG GGTTGCCGAT TCAGTTACCT
CTCAACTACT ACCCTAATGA TGACCCGAAT CAAGTGCCGA GAGTGCGTTG GCGTAGCCAT
GCTCAACTGC TTTACACTAA CTGGCTAAAC TACGAGGTTT ATCAACCACT GTCACGCTAA
 
Protein sequence
MPIIIPQDLP ARRILDAESV FTLGDADARR QDIRALQVVV LNLMPTKVTT ETQIARVLAN 
TPLQVELTLI HTASYQPTHT DPEHLRNFYS TFDQIRDRQF DGLIVTGAPV ETLPWLAVDY
WSELTTILDW SREAVRSSLF ICWGAQAALQ HFHGIEKQTL PAKRFGVFWH HLRDRSSPLV
RGHDDDFLVP VSRHTEVIAA EVLAQSQLQI LAESSEAGLH LLWDADQHRT YLFNHPEYDA
DTLDREYRRD REKGLPIQLP LNYYPNDDPN QVPRVRWRSH AQLLYTNWLN YEVYQPLSR