Gene Synpcc7942_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0332 
Symbol 
ID3774853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp328854 
End bp329099 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content60% 
IMG OID637798738 
ProductF0F1 ATP synthase subunit C 
Protein accessionYP_399351 
Protein GI81299143 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.708113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCTC TTACCTCTGC TGCTTCCGTT TTGGCTGCTG CTCTGGCAGT GGGTCTCGCG 
GCGATTGGCC CCGGTATCGG TCAAGGTAGC GCAGCTGGTC AAGCTGTCGA AGGGATTGCT
CGTCAGCCGG AAGCTGAAGG CAAAATCCGC GGCACCCTCC TGCTTTCCCT CGCTTTCATG
GAAGCGCTGA CCATCTACGG CTTGGTCGTG GCGCTGGTGC TGCTGTTCGC GAACCCCTTC
GCGTAA
 
Protein sequence
MDSLTSAASV LAAALAVGLA AIGPGIGQGS AAGQAVEGIA RQPEAEGKIR GTLLLSLAFM 
EALTIYGLVV ALVLLFANPF A