Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0322 |
Symbol | |
ID | 3774843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 318679 |
End bp | 320049 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798728 |
Product | c-type cytochrome biogenesis protein |
Protein accession | YP_399341 |
Protein GI | 81299133 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTCTG ATCCTCTGGC CTCACCCTCC TTTGCCGATC GCTGGCGGCG GGGTCAACAG TTGTTTTGGA CCTGGCTGGC CGATCTGCGT CTCGCGATCC TGCTGCTGCT AGCGATCGCG ATCGCCAGTG CCACAGGTAC CGTGATTGAG CAGGGGCAGA GTCTTGCCTT CTATCAAGAG AACTACCCCA CCGATCCTGC CCTGTTTGGC TTTCTGTCGT GGCGCTGGAT TCTGAGCCTT GGCCTTGACC ATGTCTACCG AGCGGGCTGG TTCCTAGGGT TGCTCATTCT CTTTGGTGCC AGCCTCACGG CCTGTACTTT TCGTCGCCAA TGGCCCGCCC TGCGGGCTGC CCAGCGTTGG CAGTTCTATC AAGAGCCTCG GCAATTTACC AAGCTTGCAC TCAGTGCCAG CCTGCCTCAG GGCAAACTCG ACAGTTTGGA ACCGCTACTG CTGCAACGCC GCTACCGTCT CTTTCGGGCA GATGATGTCC TCTATGCTCG CCGAGGTCTG GCCGGACGAG TCGGTCCGAT CTTGGTGCAT GCCGGCATGC TGGTGGTGCT AGGGGGCGCC ATCTGGGGCT CCTTGGGGGG ATTTTATGCC CAGGAGATGA TTCCAAGCGG CGAGACGTTT CAGGTTCGGA ATATTGTCGA TGCCGGCCCT TGGAGTGGCA GTCGTATTCC TCAGGATTGG GCAGTTAAGG TCAATCGCTT TTGGATTGAC TATGCTCCCG ACGGTCGCAT CGATCAGTTC TACTCGGATC TGTCCGTAGT CGATCGCGAG GGACAAGAGC AAGATCGCCA GACAATTCAC GTCAATCAAC CCTTGCGCTA CGGTGGTCTG ACCTTTTATC AGGCCGACTG GGCAATCGCG GCAGCCCAAG TGCGCCTTAA CAATAGCCCT GTCCTACAAC TACCCATGGC GCAGCTCCCT GCGGCGGGTC GCATCTGGGG GACTTTTGTC CCCACAAAAC CTGATCTCAG CAGTGGGGTC TCACTGATCG CCAAGGATCT ACAGGGGACA GCGGTTATCT ACGGCAGCAA TGGCGAACCC CTAGGCACCC TGCGCAAAGG CATGGCGATC GAAGTCGAGG GCATCCGTCT CAGCTTGGTC GACCTAGTCG GCAGTACCGG CCTGCAGATC AAGTCTGATC CGGGGATTCC CTGGGTCTAT GCCGGCTTCC TGTTTGTGAT GGTGGGCGTG GTTTGCAGCT ACGTCTCCCA CGCGCAGGTC TGGGCTCTAG AGCAGGACGG TCAGCTGTAT ATTGGTGGCC GGAGCAATCG CGCCTTGGTG GCGTTCGAGC AGGAAATGCT AGCCGTTCTC GCTCAGCTGG ATGCACAAAG TAATCACTCA GCAGAAACTG CGATCGCCTG A
|
Protein sequence | MTSDPLASPS FADRWRRGQQ LFWTWLADLR LAILLLLAIA IASATGTVIE QGQSLAFYQE NYPTDPALFG FLSWRWILSL GLDHVYRAGW FLGLLILFGA SLTACTFRRQ WPALRAAQRW QFYQEPRQFT KLALSASLPQ GKLDSLEPLL LQRRYRLFRA DDVLYARRGL AGRVGPILVH AGMLVVLGGA IWGSLGGFYA QEMIPSGETF QVRNIVDAGP WSGSRIPQDW AVKVNRFWID YAPDGRIDQF YSDLSVVDRE GQEQDRQTIH VNQPLRYGGL TFYQADWAIA AAQVRLNNSP VLQLPMAQLP AAGRIWGTFV PTKPDLSSGV SLIAKDLQGT AVIYGSNGEP LGTLRKGMAI EVEGIRLSLV DLVGSTGLQI KSDPGIPWVY AGFLFVMVGV VCSYVSHAQV WALEQDGQLY IGGRSNRALV AFEQEMLAVL AQLDAQSNHS AETAIA
|
| |