Gene Synpcc7942_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0322 
Symbol 
ID3774843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp318679 
End bp320049 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content58% 
IMG OID637798728 
Productc-type cytochrome biogenesis protein 
Protein accessionYP_399341 
Protein GI81299133 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1333] ResB protein required for cytochrome c biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG ATCCTCTGGC CTCACCCTCC TTTGCCGATC GCTGGCGGCG GGGTCAACAG 
TTGTTTTGGA CCTGGCTGGC CGATCTGCGT CTCGCGATCC TGCTGCTGCT AGCGATCGCG
ATCGCCAGTG CCACAGGTAC CGTGATTGAG CAGGGGCAGA GTCTTGCCTT CTATCAAGAG
AACTACCCCA CCGATCCTGC CCTGTTTGGC TTTCTGTCGT GGCGCTGGAT TCTGAGCCTT
GGCCTTGACC ATGTCTACCG AGCGGGCTGG TTCCTAGGGT TGCTCATTCT CTTTGGTGCC
AGCCTCACGG CCTGTACTTT TCGTCGCCAA TGGCCCGCCC TGCGGGCTGC CCAGCGTTGG
CAGTTCTATC AAGAGCCTCG GCAATTTACC AAGCTTGCAC TCAGTGCCAG CCTGCCTCAG
GGCAAACTCG ACAGTTTGGA ACCGCTACTG CTGCAACGCC GCTACCGTCT CTTTCGGGCA
GATGATGTCC TCTATGCTCG CCGAGGTCTG GCCGGACGAG TCGGTCCGAT CTTGGTGCAT
GCCGGCATGC TGGTGGTGCT AGGGGGCGCC ATCTGGGGCT CCTTGGGGGG ATTTTATGCC
CAGGAGATGA TTCCAAGCGG CGAGACGTTT CAGGTTCGGA ATATTGTCGA TGCCGGCCCT
TGGAGTGGCA GTCGTATTCC TCAGGATTGG GCAGTTAAGG TCAATCGCTT TTGGATTGAC
TATGCTCCCG ACGGTCGCAT CGATCAGTTC TACTCGGATC TGTCCGTAGT CGATCGCGAG
GGACAAGAGC AAGATCGCCA GACAATTCAC GTCAATCAAC CCTTGCGCTA CGGTGGTCTG
ACCTTTTATC AGGCCGACTG GGCAATCGCG GCAGCCCAAG TGCGCCTTAA CAATAGCCCT
GTCCTACAAC TACCCATGGC GCAGCTCCCT GCGGCGGGTC GCATCTGGGG GACTTTTGTC
CCCACAAAAC CTGATCTCAG CAGTGGGGTC TCACTGATCG CCAAGGATCT ACAGGGGACA
GCGGTTATCT ACGGCAGCAA TGGCGAACCC CTAGGCACCC TGCGCAAAGG CATGGCGATC
GAAGTCGAGG GCATCCGTCT CAGCTTGGTC GACCTAGTCG GCAGTACCGG CCTGCAGATC
AAGTCTGATC CGGGGATTCC CTGGGTCTAT GCCGGCTTCC TGTTTGTGAT GGTGGGCGTG
GTTTGCAGCT ACGTCTCCCA CGCGCAGGTC TGGGCTCTAG AGCAGGACGG TCAGCTGTAT
ATTGGTGGCC GGAGCAATCG CGCCTTGGTG GCGTTCGAGC AGGAAATGCT AGCCGTTCTC
GCTCAGCTGG ATGCACAAAG TAATCACTCA GCAGAAACTG CGATCGCCTG A
 
Protein sequence
MTSDPLASPS FADRWRRGQQ LFWTWLADLR LAILLLLAIA IASATGTVIE QGQSLAFYQE 
NYPTDPALFG FLSWRWILSL GLDHVYRAGW FLGLLILFGA SLTACTFRRQ WPALRAAQRW
QFYQEPRQFT KLALSASLPQ GKLDSLEPLL LQRRYRLFRA DDVLYARRGL AGRVGPILVH
AGMLVVLGGA IWGSLGGFYA QEMIPSGETF QVRNIVDAGP WSGSRIPQDW AVKVNRFWID
YAPDGRIDQF YSDLSVVDRE GQEQDRQTIH VNQPLRYGGL TFYQADWAIA AAQVRLNNSP
VLQLPMAQLP AAGRIWGTFV PTKPDLSSGV SLIAKDLQGT AVIYGSNGEP LGTLRKGMAI
EVEGIRLSLV DLVGSTGLQI KSDPGIPWVY AGFLFVMVGV VCSYVSHAQV WALEQDGQLY
IGGRSNRALV AFEQEMLAVL AQLDAQSNHS AETAIA