Gene Synpcc7942_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0320 
Symbol 
ID3774841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp317010 
End bp318008 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content60% 
IMG OID637798726 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_399339 
Protein GI81299131 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGGG CAACCATTCT GGTGACGGGC GGCGCGGGCT ATATCGGCTC CCATACGGTG 
CGGGCACTGC AAGCCCAGGG TTACCAGCCG ATCGTGCTCG ACAACCTCAG CAATGGCCAA
CGGGCGATCG CAGCAGAGGT CCTACAGGTG CCGTTGATTG TGGGAGACAC CCGCGATCGC
CTCTTGCTCG ACCGCCTCTT TGCAGAGCAT CCGATTCAGG CAGTGATTCA CTTTGCTGCC
TCGATCGAAG TTGGAGAGTC GGTGCGCGAT CCCGGCAACT TCTACGCCAA CAACGTCAGC
GGTAGCTTGA CCTTGCTGCA GGCAATGGTG GCAGCAGGCT GTCAGCAGCT CGTGTTTTCT
TCGACCTGTG CGACCTACGG ATTGCCGCAG GTGATTCCGA TTCCCGAAGA TCATCCCCAA
GCCCCGATCA ATCCCTACGG TCGCAGCAAG TGGATGGTGG AGCAGTTTCT GCAGGATTTT
CAGGCTGCCT ACGGCTTGCG ATCGGTGATC TTCCGCTACT TCAATGCCGC TGGGGCTGAT
CCCAAGGGGG ATTTGGGCGA GGCCCACGAT CCAGAAACCC ATTTGATTCC CTTGGTGCTC
CAAGCCGCCG CCGGTCAGCG TCCCAGCATT CAGGTCTATG GCACGGACTA CCCGACATCG
GACGGCACCT GCATCCGCGA CTACATCCAT GTCTGTGATT TGGCCGATGC CCACGTACGG
GGCCTGACTT ACTTAGCGGA CGGGGGAGCT ACCACCGCCT TTAACTTGGG CAACGGCAAT
GGCTTCTCAG TCAAGGAAGT GATTGCCACC GCAGAGCGGG TCACCCAGCG ATCGATTCCG
GTGCAATTGA GCGATCGCCG CCCTGGTGAT GCGATCGCCC TTGTCGGTAG CAGCGATAAA
GCTCGCCAGA TCCTCGGTTG GGAGCCGCAA TTTCCCAGCT TAGAGACGAT GATTCAGCAT
GCATGGCAGT GGCAGCAACG CTGCGATCGC CCCTCGTGA
 
Protein sequence
MAGATILVTG GAGYIGSHTV RALQAQGYQP IVLDNLSNGQ RAIAAEVLQV PLIVGDTRDR 
LLLDRLFAEH PIQAVIHFAA SIEVGESVRD PGNFYANNVS GSLTLLQAMV AAGCQQLVFS
STCATYGLPQ VIPIPEDHPQ APINPYGRSK WMVEQFLQDF QAAYGLRSVI FRYFNAAGAD
PKGDLGEAHD PETHLIPLVL QAAAGQRPSI QVYGTDYPTS DGTCIRDYIH VCDLADAHVR
GLTYLADGGA TTAFNLGNGN GFSVKEVIAT AERVTQRSIP VQLSDRRPGD AIALVGSSDK
ARQILGWEPQ FPSLETMIQH AWQWQQRCDR PS