Gene Synpcc7942_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0300 
Symbol 
ID3773862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp298398 
End bp299435 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content59% 
IMG OID637798706 
Productrod shape-determining protein MreB 
Protein accessionYP_399319 
Protein GI81299111 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTATTC TTCGGCGCTT CTCCCTCTCC CGCGACATGG GTATTGACCT AGGGACGGCC 
AACACACTGG TCTATGTCTC CGGTAAAGGC ATTGTTTTAC AAGAGCCGTC GGTTGTCGCG
ATCGACCAAA ACCTCAAAAA ACCCCTAGCG GTCGGCTCTG AGGCCAAGTT GATGCTAGGT
CGCACCCCCG GTAGTGTCGC AGCTCTGCGC CCACTGCGGG ATGGTGTCAT CGCTGACTTT
GATGCCGCTG AGTTGATGCT CAAGCATTTC ATCCGCCAAG TCCAAGAAGG GCGATCGGGC
GTAGCTCGGG TCGTAATCGG CATTCCCAGC GGTGTCACGG GTGTGGAACG TCGCGCAGTG
ATGGAAGCGG CTACCCAAGC AGGCGCCCGA GAGGTCTATC TAATCGATGA ACCGGTGGCT
GCTGCGATCG GGGCAGGATT GCCGGTAGCT GAGCCGACAG GGACGATGAT CGTCGATATC
GGCGGCGGCA CCACGGAAGT TGCCGTGATG AGCTTGCAAG GCATTGTCCT CAGCGACTCG
GTGCGCGTGG CGGGCGATGA GCTGAGTGAG GCGATCGCGC AGTACCTCAA GAAAGTCCAC
AACCTCGTGA TTGGGGAGCG GACCTCTGAG GAAATTAAAA TCATGGTCGG GTCGGCCTTC
CCCGACAACG AATTTGATGA GACAACCATG GAAGTCCGAG GCTTGCACTT GCTGTCTGGC
CTACCTCGGA CCGTCACGAT CAAAGCAGCG GAAGTGCGCG AAAGCATGGC GGAGCCACTG
AATGTGATTG TGGAAGCCGT CAAACGCACC CTCGAAAAAA CACCGCCGGA GCTGGCTGCT
GATATCGTCG ATCGCGGCAT TGTCCTCGCC GGTGGGGGTG CTTTGGTGCG GGGGCTCGAT
GAACTGATCA GCCATGAAAC CGGCATCATC ACCCACATTG CCCCCGACCC CCTGAGCTGT
GTAGTGCTGG GCACGGGTCG CGTGCTCGAG AACTTCAAGA GTCTTGAGCG GGTGTTTAGT
GCCAGCTCCC GCGCCTAG
 
Protein sequence
MSILRRFSLS RDMGIDLGTA NTLVYVSGKG IVLQEPSVVA IDQNLKKPLA VGSEAKLMLG 
RTPGSVAALR PLRDGVIADF DAAELMLKHF IRQVQEGRSG VARVVIGIPS GVTGVERRAV
MEAATQAGAR EVYLIDEPVA AAIGAGLPVA EPTGTMIVDI GGGTTEVAVM SLQGIVLSDS
VRVAGDELSE AIAQYLKKVH NLVIGERTSE EIKIMVGSAF PDNEFDETTM EVRGLHLLSG
LPRTVTIKAA EVRESMAEPL NVIVEAVKRT LEKTPPELAA DIVDRGIVLA GGGALVRGLD
ELISHETGII THIAPDPLSC VVLGTGRVLE NFKSLERVFS ASSRA