Gene Synpcc7942_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0299 
Symbol 
ID3773861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp297624 
End bp298373 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content60% 
IMG OID637798705 
Productrod shape-determining protein MreC 
Protein accessionYP_399318 
Protein GI81299110 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG TGCTGCGTTG GTTCAATCGT TTCGGGCTCC GAGTTGCGAT CGCTGGTGGG 
TTGATCGGGG CTGCATGGAT TTTGCGGCAA ACCCAAGGGT CACTCTTGGT CGAAGTCTAC
GCCTTGCTCA CCCATCCCTT TTATCCTGGC CCCACTCAGC AAGAGTGGGT CAAGACGGCT
ACCGTTGCGG GTCTTGAGCA AGCGCTCTTG GAGGCAGAAG CGGAGAACCG TGTGCTCCGC
CAGCAGCTAG CCCTGAAGCC GAAGCAACCA GCCGGCGCGA TTTTGGCACC AATCATCGGT
CGCAGCGTCG ATAGCTGGTG GCAGCAGGTC ACGCTCGGGC GCGGTAGTCG GGATGGCGTC
CAAGTAGGCG ACAGCGTCAG CGGTCCTGGC GGTCTGGTGG GGCGCATTGT CAGCGTCTCC
CTCAACACCA GCCGCGTATT GTTAATCACA GACCCCAGCA GCGGTGTGGG CGTGATGATT
AGCCGATCGC GCAGTCAGGG CTATATTCGC GGCCAAGGGA CCAATCAGGT CACCGTGCGT
TTCTTCGATC GCGATCCGGT GGTTCGCCCC GGCGATGTCG CTGTCACTTC TAGCGCTAGT
ACACTCTTTC CTGCTGGCTT ACCTGTGGGT GTCGTTCAAA AAATCGATCT ACAGGCCACT
CCTGCCCCAG AAGCAATCCT GCAGCTGTCA GCGCCGATTG GGCAGCTGGA ATGGCTGACA
ATTCAGCGAT CGGTGCCCAG CAGACCATGA
 
Protein sequence
MADVLRWFNR FGLRVAIAGG LIGAAWILRQ TQGSLLVEVY ALLTHPFYPG PTQQEWVKTA 
TVAGLEQALL EAEAENRVLR QQLALKPKQP AGAILAPIIG RSVDSWWQQV TLGRGSRDGV
QVGDSVSGPG GLVGRIVSVS LNTSRVLLIT DPSSGVGVMI SRSRSQGYIR GQGTNQVTVR
FFDRDPVVRP GDVAVTSSAS TLFPAGLPVG VVQKIDLQAT PAPEAILQLS APIGQLEWLT
IQRSVPSRP