Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0299 |
Symbol | |
ID | 3773861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 297624 |
End bp | 298373 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637798705 |
Product | rod shape-determining protein MreC |
Protein accession | YP_399318 |
Protein GI | 81299110 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGATG TGCTGCGTTG GTTCAATCGT TTCGGGCTCC GAGTTGCGAT CGCTGGTGGG TTGATCGGGG CTGCATGGAT TTTGCGGCAA ACCCAAGGGT CACTCTTGGT CGAAGTCTAC GCCTTGCTCA CCCATCCCTT TTATCCTGGC CCCACTCAGC AAGAGTGGGT CAAGACGGCT ACCGTTGCGG GTCTTGAGCA AGCGCTCTTG GAGGCAGAAG CGGAGAACCG TGTGCTCCGC CAGCAGCTAG CCCTGAAGCC GAAGCAACCA GCCGGCGCGA TTTTGGCACC AATCATCGGT CGCAGCGTCG ATAGCTGGTG GCAGCAGGTC ACGCTCGGGC GCGGTAGTCG GGATGGCGTC CAAGTAGGCG ACAGCGTCAG CGGTCCTGGC GGTCTGGTGG GGCGCATTGT CAGCGTCTCC CTCAACACCA GCCGCGTATT GTTAATCACA GACCCCAGCA GCGGTGTGGG CGTGATGATT AGCCGATCGC GCAGTCAGGG CTATATTCGC GGCCAAGGGA CCAATCAGGT CACCGTGCGT TTCTTCGATC GCGATCCGGT GGTTCGCCCC GGCGATGTCG CTGTCACTTC TAGCGCTAGT ACACTCTTTC CTGCTGGCTT ACCTGTGGGT GTCGTTCAAA AAATCGATCT ACAGGCCACT CCTGCCCCAG AAGCAATCCT GCAGCTGTCA GCGCCGATTG GGCAGCTGGA ATGGCTGACA ATTCAGCGAT CGGTGCCCAG CAGACCATGA
|
Protein sequence | MADVLRWFNR FGLRVAIAGG LIGAAWILRQ TQGSLLVEVY ALLTHPFYPG PTQQEWVKTA TVAGLEQALL EAEAENRVLR QQLALKPKQP AGAILAPIIG RSVDSWWQQV TLGRGSRDGV QVGDSVSGPG GLVGRIVSVS LNTSRVLLIT DPSSGVGVMI SRSRSQGYIR GQGTNQVTVR FFDRDPVVRP GDVAVTSSAS TLFPAGLPVG VVQKIDLQAT PAPEAILQLS APIGQLEWLT IQRSVPSRP
|
| |