Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0282 |
Symbol | glyA |
ID | 3773844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 278139 |
End bp | 279422 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798688 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_399301 |
Protein GI | 81299093 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGAGA CGAACTTCGA CTTCCTCGCC CAAGGTGATC CGGCGATCGC GGCCATCATT GGTCGGGAAC TGCAGCGCCA GCAAGAACAC CTTGAACTGA TCGCCAGCGA AAACTTTGCC TCACCAGCGG TGATGGCAGC TCAAGGCTCG GTGCTGACCA ACAAGTATGC AGAAGGTCTG CCCAGCAAAC GCTACTACGG CGGCTGTGAG TTCGTTGACC AAGCGGAAGA ATTGGCGATC GAGCGGGCTA AAGAACTGTT CGGCGCAGCC CACGCCAACG TTCAGCCCCA CAGCGGTGCT CAGGCCAACT TTGCGGTCTT CCTGACCCTG CTGCAACCGG GCGATACTTT CCTAGGCATG GACCTGTCCC ACGGCGGGCA CCTAACCCAC GGCTCACCGG TTAACGTCTC GGGCAAATGG TTCAATGCTG GTCACTACGG CGTCAACCGT GAAACCGAGC GTCTGGATTA CGATGCCATC CGCGAGCTCG CTCTGCAGCA CCGTCCTAAA CTGATCATCT GCGGCTACTC GGCTTATCCC CGCACCATCG ACTTTGCCAA ATTCCGCGAA ATTGCTGATG AAGTCGGCGC ATACTTGCTG GCGGACATGG CGCACATCGC CGGTTTAGTC GCTGCGGGCC TGCATCCTAG CCCAATTCCT CACTGCGATG TCGTCACGAC AACCACCCAC AAAACCCTGC GCGGCCCTCG TGGCGGCTTG ATCCTGACGC GCGATGCGGA ACTCGGCAAG AAACTCGACA AATCCGTCTT CCCCGGCACC CAAGGGGGCC CGCTGGAGCA CGTAATTGCT GCGAAAGCCG TCGCCTTCGG CGAAGCCCTA CGCCCTGAGT TCAAGACCTA TTCAGCGCAA GTGATTGCCA ACGCTCAAGC TTTGGCTCGT CAACTGCAAG CTCGCGGCCT CAAGATCGTC TCGGATGGCA CCGACAACCA CCTCTTGCTC GTCGACCTGC GATCGATCGG CATGACCGGT AAAGTAGCTG ATCTGTTGGT CAGCGATGTG AACATCACCG CCAACAAGAA CACGGTGCCC TTCGATCCCG AATCGCCGTT TGTCACCAGT GGCATTCGCC TGGGTACGGC AGCGATGACA ACGCGGGGCT TCAAGGAAGC AGAATTTGCG ATCGTGGCAG ACATTATTGC CGATCGCCTA CTCAACCCCG AAGACAGCAG CATGGAAGAC AGCTGCCGTC GCCGCGTCCT CGAATTATGC CAGCGCTTCC CGCTGTACCC GCACCTGTCA CCCGCAACGC CAGTCGCGGT TTAG
|
Protein sequence | MTETNFDFLA QGDPAIAAII GRELQRQQEH LELIASENFA SPAVMAAQGS VLTNKYAEGL PSKRYYGGCE FVDQAEELAI ERAKELFGAA HANVQPHSGA QANFAVFLTL LQPGDTFLGM DLSHGGHLTH GSPVNVSGKW FNAGHYGVNR ETERLDYDAI RELALQHRPK LIICGYSAYP RTIDFAKFRE IADEVGAYLL ADMAHIAGLV AAGLHPSPIP HCDVVTTTTH KTLRGPRGGL ILTRDAELGK KLDKSVFPGT QGGPLEHVIA AKAVAFGEAL RPEFKTYSAQ VIANAQALAR QLQARGLKIV SDGTDNHLLL VDLRSIGMTG KVADLLVSDV NITANKNTVP FDPESPFVTS GIRLGTAAMT TRGFKEAEFA IVADIIADRL LNPEDSSMED SCRRRVLELC QRFPLYPHLS PATPVAV
|
| |