Gene Synpcc7942_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0282 
SymbolglyA 
ID3773844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp278139 
End bp279422 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content59% 
IMG OID637798688 
Productserine hydroxymethyltransferase 
Protein accessionYP_399301 
Protein GI81299093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAGA CGAACTTCGA CTTCCTCGCC CAAGGTGATC CGGCGATCGC GGCCATCATT 
GGTCGGGAAC TGCAGCGCCA GCAAGAACAC CTTGAACTGA TCGCCAGCGA AAACTTTGCC
TCACCAGCGG TGATGGCAGC TCAAGGCTCG GTGCTGACCA ACAAGTATGC AGAAGGTCTG
CCCAGCAAAC GCTACTACGG CGGCTGTGAG TTCGTTGACC AAGCGGAAGA ATTGGCGATC
GAGCGGGCTA AAGAACTGTT CGGCGCAGCC CACGCCAACG TTCAGCCCCA CAGCGGTGCT
CAGGCCAACT TTGCGGTCTT CCTGACCCTG CTGCAACCGG GCGATACTTT CCTAGGCATG
GACCTGTCCC ACGGCGGGCA CCTAACCCAC GGCTCACCGG TTAACGTCTC GGGCAAATGG
TTCAATGCTG GTCACTACGG CGTCAACCGT GAAACCGAGC GTCTGGATTA CGATGCCATC
CGCGAGCTCG CTCTGCAGCA CCGTCCTAAA CTGATCATCT GCGGCTACTC GGCTTATCCC
CGCACCATCG ACTTTGCCAA ATTCCGCGAA ATTGCTGATG AAGTCGGCGC ATACTTGCTG
GCGGACATGG CGCACATCGC CGGTTTAGTC GCTGCGGGCC TGCATCCTAG CCCAATTCCT
CACTGCGATG TCGTCACGAC AACCACCCAC AAAACCCTGC GCGGCCCTCG TGGCGGCTTG
ATCCTGACGC GCGATGCGGA ACTCGGCAAG AAACTCGACA AATCCGTCTT CCCCGGCACC
CAAGGGGGCC CGCTGGAGCA CGTAATTGCT GCGAAAGCCG TCGCCTTCGG CGAAGCCCTA
CGCCCTGAGT TCAAGACCTA TTCAGCGCAA GTGATTGCCA ACGCTCAAGC TTTGGCTCGT
CAACTGCAAG CTCGCGGCCT CAAGATCGTC TCGGATGGCA CCGACAACCA CCTCTTGCTC
GTCGACCTGC GATCGATCGG CATGACCGGT AAAGTAGCTG ATCTGTTGGT CAGCGATGTG
AACATCACCG CCAACAAGAA CACGGTGCCC TTCGATCCCG AATCGCCGTT TGTCACCAGT
GGCATTCGCC TGGGTACGGC AGCGATGACA ACGCGGGGCT TCAAGGAAGC AGAATTTGCG
ATCGTGGCAG ACATTATTGC CGATCGCCTA CTCAACCCCG AAGACAGCAG CATGGAAGAC
AGCTGCCGTC GCCGCGTCCT CGAATTATGC CAGCGCTTCC CGCTGTACCC GCACCTGTCA
CCCGCAACGC CAGTCGCGGT TTAG
 
Protein sequence
MTETNFDFLA QGDPAIAAII GRELQRQQEH LELIASENFA SPAVMAAQGS VLTNKYAEGL 
PSKRYYGGCE FVDQAEELAI ERAKELFGAA HANVQPHSGA QANFAVFLTL LQPGDTFLGM
DLSHGGHLTH GSPVNVSGKW FNAGHYGVNR ETERLDYDAI RELALQHRPK LIICGYSAYP
RTIDFAKFRE IADEVGAYLL ADMAHIAGLV AAGLHPSPIP HCDVVTTTTH KTLRGPRGGL
ILTRDAELGK KLDKSVFPGT QGGPLEHVIA AKAVAFGEAL RPEFKTYSAQ VIANAQALAR
QLQARGLKIV SDGTDNHLLL VDLRSIGMTG KVADLLVSDV NITANKNTVP FDPESPFVTS
GIRLGTAAMT TRGFKEAEFA IVADIIADRL LNPEDSSMED SCRRRVLELC QRFPLYPHLS
PATPVAV