Gene Synpcc7942_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0272 
Symbol 
ID3773834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp267889 
End bp268683 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content57% 
IMG OID637798678 
Producturoporphyrinogen-III synthase 
Protein accessionYP_399291 
Protein GI81299083 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC AGCCGCTGAT CGGTAAAACC ATTTTGACGA CGCGAGCCGC GGGGCAATCT 
TCGCCCTTTG CCGCACAACT GCGGGCCGCT GGCGCAGCCG TGATCGAGAT GCCGACCCTA
GAAATCGGGC CGCCTAGCTC TTGGCTGCCT CTAGATGAGG CGATCGCGGC GATCGCAGAC
TTTGATTGGC TGATTTTGGC CTCCGCCAAT GCCGTTGAAG CCGTGCAACA GCGGTTAGCT
GCACAGCAAA AAAGCTGGAG CGATGTTCCC TGCGCGATCG CGGTTGTCGG TCAGAAAACC
GCTCAAGTTC TCGCTGCTCA AGGTGGTAAG GCAGATTACA TCCCGCCGGA ATTTATTGCT
GAGTCGTTGG TTGAACATTT TCCTCAGCCT GTTGCCGGTC AACGATTGCT TTTCCCACGC
GTTGAAACCG GCGGCCGTGA GCAGATTACT CAAGCCCTGC AGTCGCAAGG TGCGATCGTG
GTGGAAGTGC CCGCCTACGA GTCGCGATGT CCCAGTCAGA TTCCCGATGA TGCCTTGATT
GCCTTGCGGC AGGCGCATTT GAACTTGATT AGCTTCACCA GTTCCAAAAC GGTGCGCAAC
TTCTGTCAGT TGATGGCGTC GAATCTCGGC GTGGACTGGT CAGCCCGCAT CTCGGGTGTG
GCGATCGCTT CCATCGGTCC CCAGACTTCG ATCACCTGTC AGGAACTCTT GGGTCGCGTC
GAAGTTGAGG CACAGGAGTA CACTTTGGAC GGCCTATTGT TGGCGATCGA ACAATGGGCG
CGCCAAACCA CGTAA
 
Protein sequence
MAEQPLIGKT ILTTRAAGQS SPFAAQLRAA GAAVIEMPTL EIGPPSSWLP LDEAIAAIAD 
FDWLILASAN AVEAVQQRLA AQQKSWSDVP CAIAVVGQKT AQVLAAQGGK ADYIPPEFIA
ESLVEHFPQP VAGQRLLFPR VETGGREQIT QALQSQGAIV VEVPAYESRC PSQIPDDALI
ALRQAHLNLI SFTSSKTVRN FCQLMASNLG VDWSARISGV AIASIGPQTS ITCQELLGRV
EVEAQEYTLD GLLLAIEQWA RQTT