Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0272 |
Symbol | |
ID | 3773834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 267889 |
End bp | 268683 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637798678 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_399291 |
Protein GI | 81299083 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGC AGCCGCTGAT CGGTAAAACC ATTTTGACGA CGCGAGCCGC GGGGCAATCT TCGCCCTTTG CCGCACAACT GCGGGCCGCT GGCGCAGCCG TGATCGAGAT GCCGACCCTA GAAATCGGGC CGCCTAGCTC TTGGCTGCCT CTAGATGAGG CGATCGCGGC GATCGCAGAC TTTGATTGGC TGATTTTGGC CTCCGCCAAT GCCGTTGAAG CCGTGCAACA GCGGTTAGCT GCACAGCAAA AAAGCTGGAG CGATGTTCCC TGCGCGATCG CGGTTGTCGG TCAGAAAACC GCTCAAGTTC TCGCTGCTCA AGGTGGTAAG GCAGATTACA TCCCGCCGGA ATTTATTGCT GAGTCGTTGG TTGAACATTT TCCTCAGCCT GTTGCCGGTC AACGATTGCT TTTCCCACGC GTTGAAACCG GCGGCCGTGA GCAGATTACT CAAGCCCTGC AGTCGCAAGG TGCGATCGTG GTGGAAGTGC CCGCCTACGA GTCGCGATGT CCCAGTCAGA TTCCCGATGA TGCCTTGATT GCCTTGCGGC AGGCGCATTT GAACTTGATT AGCTTCACCA GTTCCAAAAC GGTGCGCAAC TTCTGTCAGT TGATGGCGTC GAATCTCGGC GTGGACTGGT CAGCCCGCAT CTCGGGTGTG GCGATCGCTT CCATCGGTCC CCAGACTTCG ATCACCTGTC AGGAACTCTT GGGTCGCGTC GAAGTTGAGG CACAGGAGTA CACTTTGGAC GGCCTATTGT TGGCGATCGA ACAATGGGCG CGCCAAACCA CGTAA
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Protein sequence | MAEQPLIGKT ILTTRAAGQS SPFAAQLRAA GAAVIEMPTL EIGPPSSWLP LDEAIAAIAD FDWLILASAN AVEAVQQRLA AQQKSWSDVP CAIAVVGQKT AQVLAAQGGK ADYIPPEFIA ESLVEHFPQP VAGQRLLFPR VETGGREQIT QALQSQGAIV VEVPAYESRC PSQIPDDALI ALRQAHLNLI SFTSSKTVRN FCQLMASNLG VDWSARISGV AIASIGPQTS ITCQELLGRV EVEAQEYTLD GLLLAIEQWA RQTT
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