Gene Synpcc7942_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0263 
Symbol 
ID3773825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp260700 
End bp261620 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content54% 
IMG OID637798669 
Producthypothetical protein 
Protein accessionYP_399282 
Protein GI81299074 
COG category[S] Function unknown 
COG ID[COG1624] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00159] conserved hypothetical protein TIGR00159 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGACT GGCTGACGCA GACAGGAACA TGGCTTAGCA GCGGCTCCGG CCTGCTGCTG 
CGCAATGCCT TGGATATCAG CCTCGTCCTC ATCCTCTTCT ACGTCATCTT GGTGTTGATC
GGAGAGCGGC GTACCCTTTG GATGGTGCGG GGCTTCATCG TACTAATGTT GGCAGCGGCT
ATCAGCAGTC GACTCAACCT CACCCTGCTC AACTTTGTTC TCAACAACTT AGTCATTGGC
TCGGCTGTAG CCATGGCAGT CTTGCTGCAG TCAGAATTCC GGCGCTTTTT GGAGCAGTTA
GGACGGGGGG AAGTTGCGGC GTTATTCCGC CCGAATGCGC GATCGCAACC TCGGGCTGGC
GGTGTAGCTG AGGAGATTAT TGAAGCTGTC AAAGAACTCT CCCAGAATCG TACTGGCGCC
CTGATCGTCA TTGAGACTGG CTCCAGCATC GATGATCGCG ATGTGAATTC TCTGGGGGTG
CGCCTCAACG CCGAAGTGTC AAGTGAGCTG CTCCAGTCCA TTTTTCAAAC CAGCACACAG
CTCCATGACG GTGCAGTCTT GATTTCCGAG AATCGGGTGG TTGCAGCAGG AGTGATTCTG
CCCTTGTCAG AACAGGTTAT TTCACGACGA CTGGGCACGC GACACCGTGC AGCTTTAGGA
ATTACCGAGC GGCTGAATCA ATGTATTTGC ATCGTGGTTT CTGAAGAAAC GGGTTCAATT
TCGCTGGCAG AACAAGGAAT CCTGAATCGC CCGCTGACTA GTAGTAAACT CAAGGCATTG
TTGGAAGAGC GCATGTCGCT TGCTGCCCAG CGGGAGGTCA TTGCTCCTGA TTTGCGATCG
CTCTCTCGCT ACCTTTACAG CTCTAGTCGT TCGGTTCTAC GACACCTCAA TCTCTTGGGT
TCCCGCCGAG GTCGTCCATG A
 
Protein sequence
MGDWLTQTGT WLSSGSGLLL RNALDISLVL ILFYVILVLI GERRTLWMVR GFIVLMLAAA 
ISSRLNLTLL NFVLNNLVIG SAVAMAVLLQ SEFRRFLEQL GRGEVAALFR PNARSQPRAG
GVAEEIIEAV KELSQNRTGA LIVIETGSSI DDRDVNSLGV RLNAEVSSEL LQSIFQTSTQ
LHDGAVLISE NRVVAAGVIL PLSEQVISRR LGTRHRAALG ITERLNQCIC IVVSEETGSI
SLAEQGILNR PLTSSKLKAL LEERMSLAAQ REVIAPDLRS LSRYLYSSSR SVLRHLNLLG
SRRGRP