| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0232 |
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| Symbol | |
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| ID | 3775840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 227939 |
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| End bp | 229285 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637798638 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_399251 |
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| Protein GI | 81299043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.549272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGC CGTTCGTCTT GCTCCCTACT GAGGATTCTC ATCAGACCTT GCGGATCCAG
CCCCCCAGCA CTGGGATCGG CTTACGGGGT CGAATTCGGG TGCCAGGCGA CAAGTCCATT
TCCCACCGAG CCTTGATGTT GGGGGCGATC GCCTCAGGTG AAACCACGAT CGAAGGCTTG
CTGCTGGGGG AAGACCCACT CAGCACGGCG GCTTGCTTTC GGGCGATGGG CGCTGAAATT
TCGGAGCTGA ACTCCGAGTT GGTGCGGGTT AAAGGCATTG GTCTCCAAAA TCTGCAGGAG
CCCCTCGACG TTCTCAATGC GGGCAATAGC GGCACCACAA TTCGCCTGAT GATGGGCTTA
CTCGCCGGTC AGCGCGATCG CTTTTTCTGC GTGACAGGCG ATGAGTCGCT GCGCAGTCGA
CCAATGGCTC GGGTCATTCA GCCGCTCAGC CAAATGGGAG CCGAAATTCG TGGGCGGCAG
GGCAATACGC GTGCACCGCT GGCGATTTCG GGGCGATCGC TGCAACCGAT TCGCTACGTT
TCCCCGATCG CCTCTGCCCA AGTGAAGTCG AGCATTTTGC TGGCGGGGTT GACCTGTGAA
GGCCAAACCA CCGTAGTGGA ACCGGCACTC TCGCGAGATC ACAGCGAGCG GATGTTCCGC
GCCTTTGGAG CAAAGCTGAC AGTCAACCCC GAGGAGATTA GCGTCACGGT GGAAGGCCCA
GCGGAACTGA CAGGTCAGCC GGTAGTCGTG CCCGGAGATA TCAGCTCCGC TGCTTTTTGG
TTGGTCGCAG CCGCGATCGT GCCGGACTCG GATTTGCTGA TTGAGAATGT CGGCGTCAAT
CCCACCCGCA CGGGCATCCT TGAAGCCCTG CAACAGATGG AAGCCCAGAT CACGCTGGAA
AATGAGCGAA TTGTGGCAGG CGAACCCGTC GCCGATTTAC GCGTGCGCAG CAGCAATCTA
CAGGCAATCG AAATCGGCGG ATCGCTGATC CCCCGCTTGA TTGATGAGGT ACCGATTCTG
GCGGTAGCGG CAGCCTTTGC CAAGGGCACC ACGATTATTC GAGATGCCGA AGAACTGCGG
GTAAAAGAGA GCGATCGCAT TGCGGTGATG GCCAGTGAGC TGGGCCGCAT GGGCGCAACG
ATCTCGGAGC GACCGGATGG CCTAGAAATT ACTGGCGGTG CTGCTCTCAC TGGGGCCACA
GTCGATAGCT ATACCGATCA CCGGATTGCT ATGAGCTTGG CGATCGCGGC CTTGCAAGCA
AAGGGTCAAA CTCAGATCCA GCAAGCTGAA GCAGCAGCAG TTTCCTATCC AGATTTTGTG
CCGACCTTGC AACAGCTTTT GGGATAG
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| Protein sequence | MAQPFVLLPT EDSHQTLRIQ PPSTGIGLRG RIRVPGDKSI SHRALMLGAI ASGETTIEGL
LLGEDPLSTA ACFRAMGAEI SELNSELVRV KGIGLQNLQE PLDVLNAGNS GTTIRLMMGL
LAGQRDRFFC VTGDESLRSR PMARVIQPLS QMGAEIRGRQ GNTRAPLAIS GRSLQPIRYV
SPIASAQVKS SILLAGLTCE GQTTVVEPAL SRDHSERMFR AFGAKLTVNP EEISVTVEGP
AELTGQPVVV PGDISSAAFW LVAAAIVPDS DLLIENVGVN PTRTGILEAL QQMEAQITLE
NERIVAGEPV ADLRVRSSNL QAIEIGGSLI PRLIDEVPIL AVAAAFAKGT TIIRDAEELR
VKESDRIAVM ASELGRMGAT ISERPDGLEI TGGAALTGAT VDSYTDHRIA MSLAIAALQA
KGQTQIQQAE AAAVSYPDFV PTLQQLLG
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