Gene Synpcc7942_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0231 
Symbol 
ID3775839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp227407 
End bp227931 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content57% 
IMG OID637798637 
Productputative acetyltransferase 
Protein accessionYP_399250 
Protein GI81299042 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.329835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGAAG GAATCATCCG TCCGGCGATC GCAGCGGATT GGCCTGCCAT TTGGGCAATT 
CTGGAGCCGA TTTTTCGGGC GGGGGAAACC TATCCCTACC CCCCCGACAT TTCGGAAACC
GAAGCTCAAA CAGTCTGGAT GACGGTGCCG ACCCAGACCT TTGTCTTTGA GTCAGGCGAT
CGCCAAATTC TAGGAACCTA CTACCTCAAA CCCAATCAAC CCGGACTGGG TTCTCACGTT
TGCAACTGCG GCTTTGCTGT GGCTGCCGCT GCACGCGGGC AAGGGGTTGG CAAAACCCTG
GGACTGCACG CGCTGCAAGT GGCGTCCTCT TTCGGCTTTC GAGCGATGCA ATTCAATCTC
GTGGTTGCGA CGAATACCCC CTCGATTCAG CTCTGGCAAC AGTTGGGGTT CACTACGATC
GGTCGACTAC CGCAAGCGTT TCGTCACCCC CAACAAGGCT GGGTCGATGC GCTGATTTTC
TACAAGTTGC TTGAGGAGCC AGTCGAAGCG GCAATCCCCG ATTGA
 
Protein sequence
MFEGIIRPAI AADWPAIWAI LEPIFRAGET YPYPPDISET EAQTVWMTVP TQTFVFESGD 
RQILGTYYLK PNQPGLGSHV CNCGFAVAAA ARGQGVGKTL GLHALQVASS FGFRAMQFNL
VVATNTPSIQ LWQQLGFTTI GRLPQAFRHP QQGWVDALIF YKLLEEPVEA AIPD