Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0203 |
Symbol | |
ID | 3775811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 204483 |
End bp | 205589 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798609 |
Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
Protein accession | YP_399222 |
Protein GI | 81299014 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.860488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATC GCGATCGCCA GTACATGCAG CGCTGTTTGG AACTAGCAGC CCAAGCAGCT GGACAAACCG CCCCCAACCC GATGGTCGGC TGCATCATCG TCCAAGGCGA GGAAATCGTG GGTGAAGGCT TCCATCCGGC CGCCGGTCAG CCCCATGCCG AAGTGTTTGC CCTGCGACAA GCGGGCGATC GCGCTCGGGG AGCAACGCTC TACGTCAATC TTGAACCCTG TAATCACTAT GGCCGGACGC CGCCTTGTAG CGAAGCAGTC GTCGCCGCTG GTCTAAAGCG GGTTGTAGTC GGCATGGTTG ACCCTGATCC CCGAGTGGCC GGTGGTGGCA TTGCGCGACT TCAGCAAGCA GGCATTGAAG TCACGGTCGG CGTCGAGCAA GCCGCCTGTG AGCAAATGAA TGAAGCGTTT GTTTGGCGGG TGACTCAGCG TCGTCCCTTT GGCATTCTCA AGTACGCCAT GACCTTGGAT GGCCGGATCG CCGCCAGTAC AGGGCATAGC GCCTGGGTCA GCAGTCCTGA ATCACGTCGC CAAGTTCACT CACTGCGATC GCAAGTGGAT GCAGTGATTG TGGGCGGCAA TACAGTGCGG CTGGACAACC CCCGTCTGAC TTGTCATGAC ATCAGCGATC GCCATCCCCT GCGGGTCGTG ATGAGTCGCC GTTTGGATTT GCCGTTAGAG GCTAACCTCT GGCAGACCGA CATTGCGCCA ACACTCGTTT TTACTGAAGA GACTGCCGAT CGCGATCGCT GGCGGAAACT CGAAGACCAA GGCGTAGAAG TGGTTGTGCG ATCGCCCCTC ACGCCGAGTG AAGTCAGTGC TGAGTTATTC AATCGCGGTC TTTCGACCCT GCTCTGGGAA TGTGGCGGTA CTTTGGCGGC AGCGGCTTTG CGAGAAGGTC AGATCCAGAA GCTGCTGGCT TTCATTGCCC CCAAACTCAT TGGTGGCCCG CCTGGCTATA GCCCTGTCGG TGATTTGGGT TTACTGCGAA TGGATCAAGC CCTCAAAGTC GAGCGATCGC AGTGGCAAGC GATCGGGCCA GATCTCTGCT GGACCGCCTA TCTTGATCTC GTCAGCGGGC AAGAAGGAGT GTCTTAG
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Protein sequence | MSDRDRQYMQ RCLELAAQAA GQTAPNPMVG CIIVQGEEIV GEGFHPAAGQ PHAEVFALRQ AGDRARGATL YVNLEPCNHY GRTPPCSEAV VAAGLKRVVV GMVDPDPRVA GGGIARLQQA GIEVTVGVEQ AACEQMNEAF VWRVTQRRPF GILKYAMTLD GRIAASTGHS AWVSSPESRR QVHSLRSQVD AVIVGGNTVR LDNPRLTCHD ISDRHPLRVV MSRRLDLPLE ANLWQTDIAP TLVFTEETAD RDRWRKLEDQ GVEVVVRSPL TPSEVSAELF NRGLSTLLWE CGGTLAAAAL REGQIQKLLA FIAPKLIGGP PGYSPVGDLG LLRMDQALKV ERSQWQAIGP DLCWTAYLDL VSGQEGVS
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