Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0139 |
Symbol | |
ID | 3773479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 140268 |
End bp | 142106 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798545 |
Product | acetolactate synthase 3 catalytic subunit |
Protein accession | YP_399158 |
Protein GI | 81298950 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAACTGC AGACGGTCAC CATTCAACAG CGTGCGACCG GTGCTTATGC GCTGATTGAT AGTCTCTGTC AGCACGGAGT TAAGCACATC TTTGGCTATC CAGGTGGGGC AATCCTGCCC ATCTACGACG AGCTGCATCG GGCTGAGGCG GCTGGCCGTG TTCAACATAT TTTGGTACGC CACGAGCAGG GTGCAGTCCA TGCGGCAGAT GCCTACTCGC GAGCCACGGG TGAAGTCGGG GTTTGCTTTG CGACTTCTGG TCCTGGTGCA ACCAATCTCG TAACCGGGAT TGCTACGGCC CAGATGGACT CGATCCCGAT GGTGGTGGTG ACGGGGCAGG TGCCTCGCAC GGCGATCGGA ACCGACGCTT TCCAAGAGAC AGACATCTAC GGCATCACGC TACCAATCGT CAAACACTCC TACGTGGTGC GCGATCCACG GGACATGGCG CGGATTGTGG CGGAAGCCTT CCACATTGCC CAATCGGGTC GTCCTGGCCC TGTCTTGATC GATGTGCCCA AGGATGTCGG CACTGAGGAA TTTGATTATG TGCCTGTGGC TCCGGGGGAT ATTCGACTGC CGGGCTATCG TCCGACAACT CGGGGCAACC CACGTCAGAT TGCTCAGGCG ATCGCTCTGG TGAAAGTAGC CCGTCGGCCC TTGCTCTACG TTGGTGGCGG CGCAATTACG GCCGGCGCCC ATGCGGAGCT GCGGGCCTTT GCAGAGCGCT TCCAACTGCC GGTAACAACG ACTCTGATGG GCAAAGGGGC CTTTGATGAG CGGCACCCCT TGGCGCTTGG CATGCTGGGG ATGCACGGCA CGGCCTATGC CAACTTCGCC GTCAGCGAAT GTGATCTGCT GATTGCGGTG GGTGCCCGCT TTGACGATCG TGTCACGGGC AAACTGGATG AGTTCGCCTC CAAAGCGCAA GTTATTCACG TTGATATCGA TCCGGCCGAA GTCGGTAAAA ACCGCGTGCC GGAAGTGCCA ATCGTGGGCG ATGTCCGCCA GGTGCTGAAT GAGCTTCTGG CGCGTGCCGA AGAGCAAATC AGCGCCGATG ATGCGACTCG AACTCAGCCT TGGCTCGATC GCATTGCCTA CTGGAAGCGG GAATATCCTC TGCAGATTCC CTACTACGCT GATGTGCTCT CACCCCAACA AGTGATTCAC AGTTTGGGAG AAGCAGCACC GGATGCTTAC TTCACCACGG ATGTGGGTCA GCACCAAATG TGGGCTGCTC AGTTCATCAA GAATGGTCCC CGTCGTTGGA TCTCTAGTGC AGGTCTCGGT ACGATGGGCT TTGGTATGCC GGCCGCTATG GGAGCACAAA TGGCTCTGCC GGATGACACC GTCATCTGTG TGGCTGGGGA TGCCAGCATC CTGATGAATA TTCAGGAGCT GGGGACCCTA GCGCAGTACA ACATCCCGAT CAAGGTCGTT GTTGTCAATA ATGGCTGGCA GGGGATGGTG CGCCAGTGGC AAGAAGCGTT CTACGACGAG CGCTATTCCA ACTCCAACAT GGAGCGGGGC ATGCCCGACT TTGTGAAACT GGCAGAAGCC TTTGGTATCA AAGGGATGCG CGTTAGTCAT CCAGACGAGC TGCAAGCAGC GATCGCTGAA ATGTTGGCCT TTGATGGGCC GGTGTTCTTG GATGCGATCG TCAAGAGGGA TGAAAACTGT TATCCGATGG TGCCCTCTGG TCACAGCAAT GCGCAGATGC TGGGCTTGCC CAAGGACCCG ACGCTGGATT TGGATTTGGC GATCGCGACC TGTTCGAGCT GCGGCGCGAA AACCCTGCCC AGCCACAAGT TCTGTCCGGA CTGCGGCGCT AAGCTCTAG
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Protein sequence | MQLQTVTIQQ RATGAYALID SLCQHGVKHI FGYPGGAILP IYDELHRAEA AGRVQHILVR HEQGAVHAAD AYSRATGEVG VCFATSGPGA TNLVTGIATA QMDSIPMVVV TGQVPRTAIG TDAFQETDIY GITLPIVKHS YVVRDPRDMA RIVAEAFHIA QSGRPGPVLI DVPKDVGTEE FDYVPVAPGD IRLPGYRPTT RGNPRQIAQA IALVKVARRP LLYVGGGAIT AGAHAELRAF AERFQLPVTT TLMGKGAFDE RHPLALGMLG MHGTAYANFA VSECDLLIAV GARFDDRVTG KLDEFASKAQ VIHVDIDPAE VGKNRVPEVP IVGDVRQVLN ELLARAEEQI SADDATRTQP WLDRIAYWKR EYPLQIPYYA DVLSPQQVIH SLGEAAPDAY FTTDVGQHQM WAAQFIKNGP RRWISSAGLG TMGFGMPAAM GAQMALPDDT VICVAGDASI LMNIQELGTL AQYNIPIKVV VVNNGWQGMV RQWQEAFYDE RYSNSNMERG MPDFVKLAEA FGIKGMRVSH PDELQAAIAE MLAFDGPVFL DAIVKRDENC YPMVPSGHSN AQMLGLPKDP TLDLDLAIAT CSSCGAKTLP SHKFCPDCGA KL
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