Gene Synpcc7942_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0122 
Symbol 
ID3773462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp121831 
End bp123408 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content42% 
IMG OID637798528 
ProductEAL 
Protein accessionYP_399141 
Protein GI81298933 
COG category[T] Signal transduction mechanisms 
COG ID[COG4943] Predicted signal transduction protein containing sensor and EAL domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAC GCAATGCTCT TATTTTCGCA GTTGGAACCA GTGTGTTTGC TATCGCTTTA 
CCAACTCTAA TCTCAATCAA TATTGCTAGC AGAGAAGCAT TAATTGGTGA GCAGAATTAT
ATGCTGGCTA CTGCTCGGGG GTTGCTTCGT AGCTCAGAGA AAGCAGCAGA TCAAGTTGAT
AAAGGTTTTA AAGAGTTACG AGCCCTTCAG TCTGTTCAGA CCTGCGATCC AGAGCAGATT
CAGGTCATGA GGAAGATTGA CCTTGCCTCA GCTTATATTC AAGCAATTGG CTATGTTTCT
GGTAACAAGC TAGTTTGCTC TTCAATGGGG AAAGATTCAC TTGACTTAGG TCCTGTGGAC
ATTGTTCAGC CTAGCGGAGC AAAGCTCAGG CGTAATGTTG AATTTGATTT TGCTAAAGGG
CTTAAATTTA TTGTAATTGA ACGGGATAGT TTTGCAGCAG TTATTCAGAA GGATGTGCCA
CTTGATATTT CCAAAGATAT AGAAAATATA TCAATTACAA CTTTATCAAA ATCTAATCCT
GAGACCCTGA CAGCTCGTGG TTTCATAGAT CCTAAGTGGA TTTCAGCCCT CAACAATCAG
CAAGAATCCA CTTTTATCGA CAAGGGACAT ATCATTGCAG CTGTCTCCTC TCAACGTTAT
TTTTTAGGCG CAGTTGTAGC TACTCCAGTC ACTGGACTAG CATCAAGAAC ACGAGCAATT
GCATGGATAA TTGTGCCTGT GGGTATTTTG GCAGGCATTA TCCTTTGGCT TTCAGTTATC
TACTTTTTAA GAGGCCAGTT GGCTTTGCCC GCAGTCATAA AAACTGCAAT CAAACGTCGT
GAATTTTTTC TTACCTATCA GCCAATAGTT AACCTTCAAA CAGGAGATTG GGTTGGAGCT
GAAGCACTTG TACGTTGGAA ACGCCCCGAT GGCAAGACTA TGGCTCCTGA TATTTTTATC
CCTGTCGCAG AAGATAGTGG ATTAATTCAA CTGATTACTG AATATATTGT TGAAACACTG
TCTCGGGAGG CGATCGGTTT CTTTGATGAG TTTCCAAGAT TTCATATTGG TATCAATCTA
TCGGCCGCAG ATCTGCATAC CCCGCAGACA GTTTCTCTAA TGCGTAAGGT CGCCAAGGCC
ACGAGTGCAA AACCAGGAAG TCTAATTGTG GAAGCCACAG AACGTGGCTT TACAGACCCT
AAGCTTGCAA ATGGAGTAAT CAGCAGTTTA CGAGCTGATG GAATACAAGT TGCTATTGAT
GATTTTGGGA CAGGCTACTC AAGCTTGTCT TATTTAGAAA ATCTTGAGCT TGATTACCTC
AAAATAGATA AGTCTTTCGT CGATACAATT GGCAGGGATA CAGCAACTAG CAACGTCGTC
ACACATATCA TTGAGATAGC CAAAACGCTG GATTTGATGA TGGTTGCTGA AGGAGTAGAG
ACAGAATTGC AAGCTAATTT TTTGCGCAAT CGTGGGGTTC AATATGCTCA AGGATGGTTC
TTTGCAAAGC CAATGCTTTT TCCTGAATTA TATTCAAAAC TTAGAGCTAG AGCTATGCGC
AGCTACTCTG AGGCTTGA
 
Protein sequence
MKKRNALIFA VGTSVFAIAL PTLISINIAS REALIGEQNY MLATARGLLR SSEKAADQVD 
KGFKELRALQ SVQTCDPEQI QVMRKIDLAS AYIQAIGYVS GNKLVCSSMG KDSLDLGPVD
IVQPSGAKLR RNVEFDFAKG LKFIVIERDS FAAVIQKDVP LDISKDIENI SITTLSKSNP
ETLTARGFID PKWISALNNQ QESTFIDKGH IIAAVSSQRY FLGAVVATPV TGLASRTRAI
AWIIVPVGIL AGIILWLSVI YFLRGQLALP AVIKTAIKRR EFFLTYQPIV NLQTGDWVGA
EALVRWKRPD GKTMAPDIFI PVAEDSGLIQ LITEYIVETL SREAIGFFDE FPRFHIGINL
SAADLHTPQT VSLMRKVAKA TSAKPGSLIV EATERGFTDP KLANGVISSL RADGIQVAID
DFGTGYSSLS YLENLELDYL KIDKSFVDTI GRDTATSNVV THIIEIAKTL DLMMVAEGVE
TELQANFLRN RGVQYAQGWF FAKPMLFPEL YSKLRARAMR SYSEA