Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0122 |
Symbol | |
ID | 3773462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 121831 |
End bp | 123408 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637798528 |
Product | EAL |
Protein accession | YP_399141 |
Protein GI | 81298933 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAAC GCAATGCTCT TATTTTCGCA GTTGGAACCA GTGTGTTTGC TATCGCTTTA CCAACTCTAA TCTCAATCAA TATTGCTAGC AGAGAAGCAT TAATTGGTGA GCAGAATTAT ATGCTGGCTA CTGCTCGGGG GTTGCTTCGT AGCTCAGAGA AAGCAGCAGA TCAAGTTGAT AAAGGTTTTA AAGAGTTACG AGCCCTTCAG TCTGTTCAGA CCTGCGATCC AGAGCAGATT CAGGTCATGA GGAAGATTGA CCTTGCCTCA GCTTATATTC AAGCAATTGG CTATGTTTCT GGTAACAAGC TAGTTTGCTC TTCAATGGGG AAAGATTCAC TTGACTTAGG TCCTGTGGAC ATTGTTCAGC CTAGCGGAGC AAAGCTCAGG CGTAATGTTG AATTTGATTT TGCTAAAGGG CTTAAATTTA TTGTAATTGA ACGGGATAGT TTTGCAGCAG TTATTCAGAA GGATGTGCCA CTTGATATTT CCAAAGATAT AGAAAATATA TCAATTACAA CTTTATCAAA ATCTAATCCT GAGACCCTGA CAGCTCGTGG TTTCATAGAT CCTAAGTGGA TTTCAGCCCT CAACAATCAG CAAGAATCCA CTTTTATCGA CAAGGGACAT ATCATTGCAG CTGTCTCCTC TCAACGTTAT TTTTTAGGCG CAGTTGTAGC TACTCCAGTC ACTGGACTAG CATCAAGAAC ACGAGCAATT GCATGGATAA TTGTGCCTGT GGGTATTTTG GCAGGCATTA TCCTTTGGCT TTCAGTTATC TACTTTTTAA GAGGCCAGTT GGCTTTGCCC GCAGTCATAA AAACTGCAAT CAAACGTCGT GAATTTTTTC TTACCTATCA GCCAATAGTT AACCTTCAAA CAGGAGATTG GGTTGGAGCT GAAGCACTTG TACGTTGGAA ACGCCCCGAT GGCAAGACTA TGGCTCCTGA TATTTTTATC CCTGTCGCAG AAGATAGTGG ATTAATTCAA CTGATTACTG AATATATTGT TGAAACACTG TCTCGGGAGG CGATCGGTTT CTTTGATGAG TTTCCAAGAT TTCATATTGG TATCAATCTA TCGGCCGCAG ATCTGCATAC CCCGCAGACA GTTTCTCTAA TGCGTAAGGT CGCCAAGGCC ACGAGTGCAA AACCAGGAAG TCTAATTGTG GAAGCCACAG AACGTGGCTT TACAGACCCT AAGCTTGCAA ATGGAGTAAT CAGCAGTTTA CGAGCTGATG GAATACAAGT TGCTATTGAT GATTTTGGGA CAGGCTACTC AAGCTTGTCT TATTTAGAAA ATCTTGAGCT TGATTACCTC AAAATAGATA AGTCTTTCGT CGATACAATT GGCAGGGATA CAGCAACTAG CAACGTCGTC ACACATATCA TTGAGATAGC CAAAACGCTG GATTTGATGA TGGTTGCTGA AGGAGTAGAG ACAGAATTGC AAGCTAATTT TTTGCGCAAT CGTGGGGTTC AATATGCTCA AGGATGGTTC TTTGCAAAGC CAATGCTTTT TCCTGAATTA TATTCAAAAC TTAGAGCTAG AGCTATGCGC AGCTACTCTG AGGCTTGA
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Protein sequence | MKKRNALIFA VGTSVFAIAL PTLISINIAS REALIGEQNY MLATARGLLR SSEKAADQVD KGFKELRALQ SVQTCDPEQI QVMRKIDLAS AYIQAIGYVS GNKLVCSSMG KDSLDLGPVD IVQPSGAKLR RNVEFDFAKG LKFIVIERDS FAAVIQKDVP LDISKDIENI SITTLSKSNP ETLTARGFID PKWISALNNQ QESTFIDKGH IIAAVSSQRY FLGAVVATPV TGLASRTRAI AWIIVPVGIL AGIILWLSVI YFLRGQLALP AVIKTAIKRR EFFLTYQPIV NLQTGDWVGA EALVRWKRPD GKTMAPDIFI PVAEDSGLIQ LITEYIVETL SREAIGFFDE FPRFHIGINL SAADLHTPQT VSLMRKVAKA TSAKPGSLIV EATERGFTDP KLANGVISSL RADGIQVAID DFGTGYSSLS YLENLELDYL KIDKSFVDTI GRDTATSNVV THIIEIAKTL DLMMVAEGVE TELQANFLRN RGVQYAQGWF FAKPMLFPEL YSKLRARAMR SYSEA
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