Gene Synpcc7942_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0100 
Symbol 
ID3773440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp100528 
End bp101082 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID637798506 
Producthypothetical protein 
Protein accessionYP_399119 
Protein GI81298911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCG ACACACAAAC TGCTTTAGAA CCGCTCTTAA AAGACATTGC TCAGCAACTA 
GGCGCGATCG CCCAAGCCCT GCGACCGGCG GATGAATCCT TGGGCTTTGG CCCCAGCCCC
GGACGCCAGT ACATCTATGT CAACCGTAGC CAAGGCTGTA ATTGGTATCG CCTCGATGCC
GAGGGTCATC CAATCGCAAT CGAGGCACCA GCACTTACCG GCTATATCGT CGGTCTTGAA
ATTCGGGAGC TGCAGCGGCG CGGCAAAGCC GTTCCCAAGC TGCATTTGCA CATCAAAGCC
GATCGCCATT ACGTGCTGGA ATCCGGTGCG CAATCGGTGT TCAGTAAGTC CTTACTGGTG
GCGATCGCCC AACTCCAACC GGCACAACTA CGGCAGCCAA TTACCCTGGA GCCCCAAGCG
GCTGAGGGCA ACGAAGCGGA GTTTGCCCGC CTTTACATCA ACGGTGAGTA CGTGCATGCC
CCTTGGGATG ACAACAGTGA CTTTCCGCAT CTGACCCAGC AGGCGATCGC CGTCGTCCAA
GCCGCCCAGA ACTAG
 
Protein sequence
MTIDTQTALE PLLKDIAQQL GAIAQALRPA DESLGFGPSP GRQYIYVNRS QGCNWYRLDA 
EGHPIAIEAP ALTGYIVGLE IRELQRRGKA VPKLHLHIKA DRHYVLESGA QSVFSKSLLV
AIAQLQPAQL RQPITLEPQA AEGNEAEFAR LYINGEYVHA PWDDNSDFPH LTQQAIAVVQ
AAQN