Gene Synpcc7942_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0096 
Symbol 
ID3773436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp93764 
End bp94285 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content53% 
IMG OID637798502 
Producthypothetical protein 
Protein accessionYP_399115 
Protein GI81298907 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAC TTGTTGTTGT CGGATTTCCC AATTCGCAAG AAGCCGAAGA AGTCCGAATC 
AAACTTGCTC AGCTACAGAC AGAACATTTA ATTGCCCTAG AAGATGCTGT TGTTGTCAGC
AAGGATTCCG AGGGCCATGT CAAACTCAAT CAAGCGATTA ATTTAACGGC AACTGGTGCC
GTCAGCGGCG GTTTTTGGGG CACCCTTGTC GGCTTGATCT TCCTCAATCC CTTGGCGGGT
GCGGCGATCG GTGCAGCGGC TGGTGCACTC AGCGGTTCCT TGAGCGACAT TGGCATCAAC
GATGACTTTC TGCGCGAGGT CGGCGAAACC CTGCAGGTCG GATCAGCCGC CCTCTGCCTC
CTCATCCGCG AAGCAACCCC CGATCGCATC CTGAAAGAGT TGCGAGTCTA CGCCAAAGAC
GCCCGGATTC TACAAACGAA CTTGAGCTTT GCCGATGAAG AAAACCTCAA GGCAGCCCTA
GAAAAAGCCA AAGCCGAAGC CCAAGCCCTG CGTCTCAATT AA
 
Protein sequence
MSSLVVVGFP NSQEAEEVRI KLAQLQTEHL IALEDAVVVS KDSEGHVKLN QAINLTATGA 
VSGGFWGTLV GLIFLNPLAG AAIGAAAGAL SGSLSDIGIN DDFLREVGET LQVGSAALCL
LIREATPDRI LKELRVYAKD ARILQTNLSF ADEENLKAAL EKAKAEAQAL RLN