Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0091 |
Symbol | |
ID | 3773431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 89715 |
End bp | 90326 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637798497 |
Product | hypothetical protein |
Protein accession | YP_399110 |
Protein GI | 81298902 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTCCA GCGATCGCGG TACTTCCACT TTGCAGGGCT GGCATGCCTT ACAAACGCTC TGGCGGGGCG ATCAGCGATC GGTCATTCAG GGATTGCCCC ACAGTCAACT CGCTCCCGCT TGGCAATTGC TCCTGCTGGG GGATGGCTCG CCCACACGCC ACCTACAGCT CCTGACAGGG GAACCGACTG CGGTGGACGT CATCGAAATG GCCCCGATCG CCGATCAAGA TGACGGCGCC CCTCCACCAA TCCGTGCGAT CGCGGGGCCA CGGCTACGGC GACAGGTCTG GTTGCGCACT GCTTCCGGTC AGCGTCTCGC CTACGCCACC TCTTGGTGGA CCCAGCAGCG GGTTGATGCC TACCTACGCG ATCGCGCCCA ACCGATTTGG GCCAATCTTG CCGATTTACG GACAGAGCTC TATCGCGATA TCCAAGGCGT TGAATACGGT GATAGCGCCG CTCTGAGTGA GGCTTTCGGC CAGACTGGGC CGTTCTGGGG ACGCTATTAC CTGTTCTGGC ACCAAGGACA GCCGCTGACG CTAATCTATG AGGTGTTTTC GCCGGCGATC GCCACCTATC TCGGACCAAG TACACCTCAG CCTGTGGTTT AG
|
Protein sequence | MASSDRGTST LQGWHALQTL WRGDQRSVIQ GLPHSQLAPA WQLLLLGDGS PTRHLQLLTG EPTAVDVIEM APIADQDDGA PPPIRAIAGP RLRRQVWLRT ASGQRLAYAT SWWTQQRVDA YLRDRAQPIW ANLADLRTEL YRDIQGVEYG DSAALSEAFG QTGPFWGRYY LFWHQGQPLT LIYEVFSPAI ATYLGPSTPQ PVV
|
| |