Gene Synpcc7942_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0091 
Symbol 
ID3773431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp89715 
End bp90326 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID637798497 
Producthypothetical protein 
Protein accessionYP_399110 
Protein GI81298902 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA GCGATCGCGG TACTTCCACT TTGCAGGGCT GGCATGCCTT ACAAACGCTC 
TGGCGGGGCG ATCAGCGATC GGTCATTCAG GGATTGCCCC ACAGTCAACT CGCTCCCGCT
TGGCAATTGC TCCTGCTGGG GGATGGCTCG CCCACACGCC ACCTACAGCT CCTGACAGGG
GAACCGACTG CGGTGGACGT CATCGAAATG GCCCCGATCG CCGATCAAGA TGACGGCGCC
CCTCCACCAA TCCGTGCGAT CGCGGGGCCA CGGCTACGGC GACAGGTCTG GTTGCGCACT
GCTTCCGGTC AGCGTCTCGC CTACGCCACC TCTTGGTGGA CCCAGCAGCG GGTTGATGCC
TACCTACGCG ATCGCGCCCA ACCGATTTGG GCCAATCTTG CCGATTTACG GACAGAGCTC
TATCGCGATA TCCAAGGCGT TGAATACGGT GATAGCGCCG CTCTGAGTGA GGCTTTCGGC
CAGACTGGGC CGTTCTGGGG ACGCTATTAC CTGTTCTGGC ACCAAGGACA GCCGCTGACG
CTAATCTATG AGGTGTTTTC GCCGGCGATC GCCACCTATC TCGGACCAAG TACACCTCAG
CCTGTGGTTT AG
 
Protein sequence
MASSDRGTST LQGWHALQTL WRGDQRSVIQ GLPHSQLAPA WQLLLLGDGS PTRHLQLLTG 
EPTAVDVIEM APIADQDDGA PPPIRAIAGP RLRRQVWLRT ASGQRLAYAT SWWTQQRVDA
YLRDRAQPIW ANLADLRTEL YRDIQGVEYG DSAALSEAFG QTGPFWGRYY LFWHQGQPLT
LIYEVFSPAI ATYLGPSTPQ PVV